DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and MYO1C

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:NP_001074248.1 Gene:MYO1C / 4641 HGNCID:7597 Length:1063 Species:Homo sapiens


Alignment Length:969 Identity:333/969 - (34%)
Similarity:516/969 - (53%) Gaps:112/969 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 AMHASSVQGVEDMISLGDL-HEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKL 119
            |:.|....||:|.:.|.:. .||..:.||..|::|||||||.|.:||:||||:.|.||:...::.
Human    39 ALTARDRVGVQDFVLLENFTSEAAFIENLRRRFRENLIYTYIGPVLVSVNPYRDLQIYSRQHMER 103

  Fly   120 YKERKIGELPPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLA---AISGKHS 181
            |:.....|:|||:||:.|..|..::..|:||.::|||||||||||:||.:||:.|   ....:..
Human   104 YRGVSFYEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGKTEATKRLLQFYAETCPAPERGG 168

  Fly   182 WIEQQILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHS 246
            .:..::|::||:|||||||||:|||||||||||:|:.|...|...|..|..|||||||:|.|||.
Human   169 AVRDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDFKGAPVGGHILSYLLEKSRVVHQNHG 233

  Fly   247 ERNYHVFYCILAGLSADEKSRLDLGMAAD---YKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLF 308
            |||:|:||.:|.|  .:|::...||:..:   |.||..|........:|.:::..:|.|:.|:.|
Human   234 ERNFHIFYQLLEG--GEEETLRRLGLERNPQSYLYLVKGQCAKVSSINDKSDWKVVRKALTVIDF 296

  Fly   309 SDQEIWEIIKLLAALLHCGNIKYKATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTL 373
            ::.|:.:::.::|::||.|||.:.|....|   .::.....::.:..||.:....|.:|||.|.:
Human   297 TEDEVEDLLSIVASVLHLGNIHFAANEESN---AQVTTENQLKYLTRLLSVEGSTLREALTHRKI 358

  Fly   374 FAHGETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTA-----IFKPRGTSRNAIGVLDIF 433
            .|.||.::|.|:.:|:...|||..|.:|.|.|..:|.|||.:     :..|...|...:|:|||:
Human   359 IAKGEELLSPLNLEQAAYARDALAKAVYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIY 423

  Fly   434 GFENFDQNSFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQL 498
            |||.|..||||||||||.||.|||.|::...|.|||||..|.|.|:.:::.:|:...||:..|..
Human   424 GFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYEAEGIAWEPVQYFNNKIICDLVEEKFK 488

  Fly   499 NIMALIDEEARFP-KGTDQTMLAKLHKTHGSHKNYLKPK-SDINT-------SFGLNHFAGVVFY 554
            .|::::|||...| :.||.|.|.||..|...|.::|..| :|..|       .|.|.|:||.|.|
Human   489 GIISILDEECLRPGEATDLTFLEKLEDTVKHHPHFLTHKLADQRTRKSLGRGEFRLLHYAGEVTY 553

  Fly   555 DTRGFLDKNRDTFSPDLLHLVSQSTNKFLRQIFAQDIEMGAETRKRTPTLSTQFRKSLDALMKTL 619
            ...||||||.|....:|...:..|.|..:.|.|.:. |:  ..:||..|::|||:.||..|::.|
Human   554 SVTGFLDKNNDLLFRNLKETMCSSKNPIMSQCFDRS-EL--SDKKRPETVATQFKMSLLQLVEIL 615

  Fly   620 SSCQPFFIRCIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIP 684
            .|.:|.::||||||:.|:|..||..|...|::|.|::|.:|:||||:..|..:..|::||:.|.|
Human   616 QSKEPAYVRCIKPNDAKQPGRFDEVLIRHQVKYLGLLENLRVRRAGFAYRRKYEAFLQRYKSLCP 680

  Fly   685 GVPPAHRTDCQAATSRICAVV--LG--KSDYQLGHTKVFLKDAHDLF-----LEQERDRVLTRKI 740
            ...|   |........:..:|  ||  ..:|::|.||:|::....||     ||..|..:.|:  
Human   681 ETWP---TWAGRPQDGVAVLVRHLGYKPEEYKMGRTKIFIRFPKTLFATEDALEVRRQSLATK-- 740

  Fly   741 LILQRSIRGWVYRRRFLRLRAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIRSRVLSHRFR-- 803
              :|.:.||:.:|::|||::.:||.:|.:|:|...|::....:.....::.|||..||.|..|  
Human   741 --IQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRGFVLRHAPRCP 803

  Fly   804 -------HLRGHIVGLQAHARGYL--VRREYGHKM----W----AVIKIQSHVRRMIAMR----R 847
                   |:|          ..:|  :||:....:    |    ..::..|.:.|.:.::    :
Human   804 ENAFFLDHVR----------TSFLLNLRRQLPQNVLDTSWPTPPPALREASELLRELCIKNMVWK 858

  Fly   848 Y-RKLRLEHKQFAEVLQLRKLEEQELLHRGNK--HAREIAEQHYRDRL--HELERREIQ----EQ 903
            | |.:..|.||     ||::......:.:|.|  :.:.:.......||  .|:..|.:|    |.
Human   859 YCRSISPEWKQ-----QLQQKAVASEIFKGKKDNYPQSVPRLFISTRLGTDEISPRVLQALGSEP 918

  Fly   904 LE---------------NRRRVEVNMN---IINDAARKQEEPVDDGKLVEAMFDFLPDS 944
            ::               ..|::.:..|   |:.||..||.  :|...|.......|.||
Human   919 IQYAVPVVKYDRKGYKPRSRQLLLTPNAVVIVEDAKVKQR--IDYANLTGISVSSLSDS 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 274/698 (39%)
MYSc_Myo7 77..721 CDD:276832 265/667 (40%)
MyTH4 <1138..1245 CDD:214535
B41 1251..1467 CDD:214604
FERM_B-lobe 1355..1439 CDD:271216
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:302595
MyTH4 1701..1849 CDD:214535
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
MYO1CNP_001074248.1 MYSc 43..731 CDD:214580 272/698 (39%)
MYSc_Myo1 62..718 CDD:276829 264/666 (40%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 608..630 10/21 (48%)
IQ 756..776 CDD:197470 7/19 (37%)
Myosin_TH1 874..1041 CDD:283635 20/104 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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