DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and MYO1A

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:NP_001242970.1 Gene:MYO1A / 4640 HGNCID:7595 Length:1043 Species:Homo sapiens


Alignment Length:757 Identity:300/757 - (39%)
Similarity:442/757 - (58%) Gaps:36/757 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GVEDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKERKIGEL 128
            ||||::.|..|.|..:|:||.:||:...||||.|:::::|||||.||||..:.|..|::....||
Human     9 GVEDLVLLEPLVEESLLKNLQLRYENKEIYTYIGNVVISVNPYQQLPIYGPEFIAKYQDYTFYEL 73

  Fly   129 PPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISGKH---SWIEQQILEA 190
            .|||:|:.:.||..::...:||||:|:||||:||||::||::.|:||:.||.   :.:::|:|::
Human    74 KPHIYALANVAYQSLRDRDRDQCILITGESGSGKTEASKLVMSYVAAVCGKGEQVNSVKEQLLQS 138

  Fly   191 NPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHVFYC 255
            ||:||||||||||||:||||||||:||.|...|...|..|..|||||||:|.|...|||:|:||.
Human   139 NPVLEAFGNAKTIRNNNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRLVKQLKGERNFHIFYQ 203

  Fly   256 ILAGLSADEKSRLDLGMAAD---YKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEII 317
            :|||  |||:....|.:..|   |.||....| ..:|.|||:.|..::|||.|:.||::||.:::
Human   204 LLAG--ADEQLLKALKLERDTTGYAYLNHEVS-RVDGMDDASSFRAVQSAMAVIGFSEEEIRQVL 265

  Fly   318 KLLAALLHCGNIKYKATVVDNLDATEIP-----EHINVERVAGLLGLPIQPLIDALTRRTLFAHG 377
            ::.:.:|..||:    .|.|...|:.||     :...|..:..::||..:.:..||..||:....
Human   266 EVTSMVLKLGNV----LVADEFQASGIPASGIRDGRGVREIGEMVGLNSEEVERALCSRTMETAK 326

  Fly   378 ETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFGFENFDQNS 442
            |.||:.|:..|:...|||..|.||.|:|..||.:||.:|....|..:..:|||||:|||..:.||
Human   327 EKVVTALNVMQAQYARDALAKNIYSRLFDWIVNRINESIKVGIGEKKKVMGVLDIYGFEILEDNS 391

  Fly   443 FEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIMALIDEE 507
            ||||.|||.||.|||.|::...|.|||||..|.|.|..:::.||.....||...|..|:|::|||
Human   392 FEQFVINYCNEKLQQVFIEMTLKEEQEEYKREGIPWTKVDYFDNGIICKLIEHNQRGILAMLDEE 456

  Fly   508 ARFPKG--TDQTMLAKLHKTHGSHKNYLKPKSDIN-----------TSFGLNHFAGVVFYDTRGF 559
            ...| |  :|.|.||||::....|.:| :.|...|           :.|.:.|:||.|.|:...|
Human   457 CLRP-GVVSDSTFLAKLNQLFSKHGHY-ESKVTQNAQRQYDHTMGLSCFRICHYAGKVTYNVTSF 519

  Fly   560 LDKNRDTFSPDLLHLVSQSTNKFLRQIFAQDIEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQP 624
            :|||.|....|||..:.::.:..||.:|.:.....| :.||.||...||:.|:..|||.|.|..|
Human   520 IDKNNDLLFRDLLQAMWKAQHPLLRSLFPEGNPKQA-SLKRPPTAGAQFKSSVAILMKNLYSKSP 583

  Fly   625 FFIRCIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGV-PP 688
            .:||||||||.::...|...|...|.||.|::|.:|:|||||..|.|:..|:||||.|.... |.
Human   584 NYIRCIKPNEHQQRGQFSSDLVATQARYLGLLENVRVRRAGYAHRQGYGPFLERYRLLSRSTWPH 648

  Fly   689 AHRTDCQAATSRICAVVLGKSDYQLGHTKVFLKDAHDLF-LEQERDRVLTRKILILQRSIRGWVY 752
            .:..|.:.....:..:.:...:...|.||:|::....|| ||::|...|.:...::|:..|||..
Human   649 WNGGDREGVEKVLGELSMSSGELAFGKTKIFIRSPKTLFYLEEQRRLRLQQLATLIQKIYRGWRC 713

  Fly   753 RRRFLRLRAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIR 794
            |..:..:|.:.|.:..:::|..|:|.|..::...:.:||.:|
Human   714 RTHYQLMRKSQILISSWFRGNMQKKCYGKIKASVLLIQAFVR 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 284/694 (41%)
MYSc_Myo7 77..721 CDD:276832 273/668 (41%)
MyTH4 <1138..1245 CDD:214535
B41 1251..1467 CDD:214604
FERM_B-lobe 1355..1439 CDD:271216
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:302595
MyTH4 1701..1849 CDD:214535
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
MYO1ANP_001242970.1 MYSc 8..694 CDD:214580 284/694 (41%)
MYSc_Myo1 22..681 CDD:276829 273/668 (41%)
Actin-binding. /evidence=ECO:0000255 571..593 12/21 (57%)
IQ 742..764 CDD:197470 3/14 (21%)
Myosin_TH1 847..1021 CDD:283635
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.