DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and Myh7b

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:NP_001101264.2 Gene:Myh7b / 311570 RGDID:1307994 Length:1941 Species:Rattus norvegicus


Alignment Length:1991 Identity:531/1991 - (26%)
Similarity:821/1991 - (41%) Gaps:485/1991 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IWIEPASGREFDVAIGARV-VSAEGRRIQVRDDDGDEVWLAPERRIKAMHASSVQGVEDMISLGD 73
            :|:..    |.|..:.|.| ..|.|.|:.|...| .:|....|..::.|:......:|||..:..
  Rat    35 VWVPD----EQDAYVEAEVKTEATGGRVTVETKD-QKVLTVRETEMQPMNPPRFDLLEDMAMMTH 94

  Fly    74 LHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKERKIGELPPHIFAIGDN 138
            |:||.:|.||..||...:||||:|...|.:|||:.||:||...:..||.::..|.||||:|:.||
  Rat    95 LNEAAVLHNLRQRYARWMIYTYSGLFCVTINPYKWLPVYTATVVAAYKGKRRSEAPPHIYAVADN 159

  Fly   139 AYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAIS------GKHS---------WIEQQIL 188
            ||..|.|.|::|.::|:||||||||.:||.::||.|.::      ||.:         .:|.||:
  Rat   160 AYNDMLRNRENQSMLITGESGAGKTVNTKRVIQYFAIVAALGDGPGKKAQFLATKTGGTLEDQII 224

  Fly   189 EANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHVF 253
            ||||.:||||||||:||||||||||:|.|||...|.:..|.|:.|||||||::.|...||.|||:
  Rat   225 EANPAMEAFGNAKTLRNDNSSRFGKFIRIHFGPTGKLASADIDSYLLEKSRVIFQLPGERGYHVY 289

  Fly   254 YCILAGLSADEKSRLDLGM-AADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEII 317
            |.||:|...:.:..|.|.| ..||.:.:.|.: |.:..:|..|......||.:|.||..|.....
  Rat   290 YQILSGKKPELQDMLLLSMNPYDYHFCSQGVT-TVDNMNDGEELIATDHAMDILGFSVDEKCACY 353

  Fly   318 KLLAALLHCGNIKYKATVVD---NLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTLFAHGET 379
            |::.||||.||:|:|....:   ..|.||     :.::.|.|:|:....|:..|....:....|.
  Rat   354 KIVGALLHFGNMKFKQKQREEQAEADGTE-----SADKAAYLMGVSSGDLLKGLLHPRVRVGNEY 413

  Fly   380 VVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIFK--PRGTSRNAIGVLDIFGFENFDQNS 442
            |....|.:|.|....|..|..|.|:|..:|.:||..:..  ||   :..||||||.|||.|:.||
  Rat   414 VTKGQSVEQVVFAVGALAKATYDRLFRWLVSRINQTLDTKLPR---QFFIGVLDIAGFEIFEFNS 475

  Fly   443 FEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEF-VDNQDALDLIAIKQLNIMALIDE 506
            |||.|||:.||.|||||.||:|.||||||..|.|:|..|:| :|.|..:|||. |.|.|:::::|
  Rat   476 FEQLCINFTNEKLQQFFNQHMFVLEQEEYKREGIDWVFIDFGLDLQPCIDLIE-KPLGILSILEE 539

  Fly   507 EARFPKGTDQTMLAKLHKTH-GSHKNYLKPKSD----INTSFGLNHFAGVVFYDTRGFLDKNRDT 566
            |..|||.:|.:..|||:..| |...|:.:|:.|    ....|.:.|:||||.|...|:|:||:|.
  Rat   540 ECMFPKASDASFRAKLYDNHSGKSPNFQQPRPDKKRKYQAHFEVVHYAGVVPYSIVGWLEKNKDP 604

  Fly   567 FSPDLLHLVSQSTNKFLRQIF--------AQDIEMGA-ETRKRT---PTLSTQFRKSLDALMKTL 619
            .:..::.:..:|.|:.|..::        .:..:.|. |.||:.   .|:|...:::|:.||..|
  Rat   605 LNETVVPIFQKSQNRLLATLYENYAGSCSTEPPKSGVKEKRKKAASFQTVSQLHKENLNKLMTNL 669

  Fly   620 SSCQPFFIRCIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIP 684
            .:.||.|:|||.|||.|.|.:.|..|...|||.:|::|.|||.|.|:|.|..:.:|.:|||.|.|
  Rat   670 RATQPHFVRCIVPNENKTPGVMDSFLVLHQLRCNGVLEGIRICRQGFPNRLLYADFRQRYRILNP 734

  Fly   685 -GVPPAHRTDCQAATSRICAVVLGKSD-----YQLGHTKVFLKDAHDLFLEQERDRVLTRKILIL 743
             .:|.....|.:.||.::    ||..|     ||.||||||.|......||:.||:.|.:.:.:|
  Rat   735 SAIPDDTFVDSRKATEKL----LGSLDIDHTQYQFGHTKVFFKAGLLGILEELRDQRLAKVLTLL 795

  Fly   744 QRSIRGWVYRRRFLRL---RAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIRSRVLSHRFRHL 805
            |...||.:.|..:.|:   |.|..|:|...:.:...|.:..|:: :.:::.|:||.........|
  Rat   796 QARSRGRLMRLEYQRMLGGRDALFTIQWNIRAFNAVKNWSWMKL-FFKMKPLLRSAQAEEELAAL 859

  Fly   806 RGHIVGLQAHARGYLVRREYGHKMWAVIKIQSHVRRMIAMRRYRKLRLEHKQFAEVLQLRKLEEQ 870
            |..:.||    ||.|...|                   |.|                  ::|||.
  Rat   860 RAELRGL----RGALATAE-------------------AKR------------------QELEET 883

  Fly   871 ELLHRGNKHAREIAEQHYRDRLHELERR----------------EIQEQLENRRRVEVNMNIIND 919
            ::.....|:...:..|..:|.|.:.|.|                |:.|:||:..  |||.::   
  Rat   884 QVSVTQEKNDLALQLQAEQDNLADAEERCHLLIKSKVQLEAKVKELNERLEDEE--EVNADL--- 943

  Fly   920 AARKQEEPVDDGKLVEAMFDFLPDSSSDAPTPHGGRETSVFNDLPHAQNVNQDDIIAPIHISEDE 984
            |||:::               |.|..           |.:..|:        ||:...:..:|.|
  Rat   944 AARRRK---------------LEDEC-----------TELKKDI--------DDLELTLAKAEKE 974

  Fly   985 EDLSEFKFQKFA---ATYFQGNVNHQYAKKAL----KHPLLPLHTQGDQLAAQA-LWITILRFTG 1041
            :..:|.|.:...   |...:..|.....||||    :..|..|..:.|:::|.| ..|.:.:...
  Rat   975 KQATENKVKNLTEEMAALDESVVRLTKEKKALQEAHQQALGDLQAEEDRVSALAKAKIRLEQQVE 1039

  Fly  1042 DM-----PEPKYHTMDRMDTTSVMSKVTATLGRNFIRSKEFQEAQLMGLDPDAFLKQKPRSIRHK 1101
            |:     .|.|.    ||||.....|:...|       |..||...........|::|.:....:
  Rat  1040 DLECSLEQEKKL----RMDTERAKRKLEGDL-------KLTQETVTDTTQDKQQLEEKLKKKDSE 1093

  Fly  1102 LVSLTLKRKNK--LGEDVRRRLQDDEYTADSYQSWLQSR--PTSNLEKLHFIIGHGILRAELRDE 1162
            |..|:|:.:::  ||..:::::::.:..|:..:..|::.  ..:.:||         .|||...|
  Rat  1094 LSQLSLRVEDEQLLGAQLQKKIKELQARAEELEEELEAERAARARVEK---------QRAEAARE 1149

  Fly  1163 IYCQICKQLTNNPLKSSHARGWILLSLCVGCFAPSEKFVNYLRAFIREGPPGYAPYCEERLKR-- 1225
            :. ::.::|......|:..|        .|| ...|..:..||   ||        .||.:.|  
  Rat  1150 LE-ELSERLEEAGGASAGQR--------EGC-RKREAELGRLR---RE--------LEETVLRHE 1193

  Fly  1226 -TFNNGTRNQPPSWLEL------------QATKSKKPIMLPITFMDGNTKTLLADSATTARELCN 1277
             |.....|.|..|..||            :..|.|..:.:.:..:..:.:| ||....:|.:||.
  Rat  1194 ATVAALRRKQADSAAELSEQVDSLQRIRQKLEKEKSELRMEVDDLGASVET-LARGKASAEKLCR 1257

  Fly  1278 QLSDKIS----------------------LKDQFGFSLYIALFDK---VSSLGSGGDHVMDAIS- 1316
            ...|::|                      |:.:.| .|...|.:|   :|.|..|......::. 
  Rat  1258 TYEDQLSEAKIKVEELQRQLTDASTQRGRLQTENG-ELGRLLEEKESMISQLSRGKTSAAQSLEE 1321

  Fly  1317 ---QCEQYAKEQGAQERNAPWRLFFRKEIFAPWHEPTHDQVATNLIYQQVVRGVKFGEYRCDKEE 1378
               |.|:.:|.:||                                   :...|:...:.||   
  Rat  1322 LRRQLEEESKAKGA-----------------------------------LAHAVQALRHDCD--- 1348

  Fly  1379 DLAMIAAQQYFIEYSTDMSMERLFTLLPNFIPDFCLSGVDKAIERWAALVLQAYKKSYYVKDKIA 1443
                :..:|:..|......::||            ||..:..:.:|         :|.|..|.|.
  Rat  1349 ----LLREQHEEESEAQAELQRL------------LSKANAEVAQW---------RSKYEADAIQ 1388

  Fly  1444 PLKIKEDIVSYAKYKWPLLFSRFYEAYRNSGPNLPKNDVIIAVNWTGVYVVDDQEQVLLELSFPE 1508
            ..:..|:    ||.|..|   |..||          .:.:.|.|                     
  Rat  1389 RTEELEE----AKKKLAL---RLQEA----------EEGVEAAN--------------------- 1415

  Fly  1509 ITAVSSQKTNKVFTQTFSLSTVRGEEFTFQSPNAEDIRDLVVYFLDGLKKRSKYVIALQDYRAPS 1573
             ...||.:..|:..||.|      |:.|.:...|..    ....||  ||:.....||::.|...
  Rat  1416 -AKCSSLEKAKLRLQTES------EDVTLELERATS----AAAALD--KKQRHLERALEERRRQE 1467

  Fly  1574 DGTSFLSFFKGDLIILEDESCGESVLNNGWCIGRCDRSQERGDFPAETVYVLPTLSKPPQDILAL 1638
            :...           .|.|:........|..:.|...|.|      |.:..|.||.:..:     
  Rat  1468 EEMQ-----------RELEAAQREARGLGTELFRLRHSHE------EALEALETLKRENK----- 1510

  Fly  1639 FNIEEAHHGRRLSMASNGGAVEPRDRPHTLME-------YALDHFRLPPKRTMSKTLTLSSKRSE 1696
             |::|........::.:|.:::..::....:|       .||:......:...:|||.:..:.|:
  Rat  1511 -NLQEEISDLTDQVSLSGKSIQELEKAKKALEGEKSELQAALEEAEGALELEETKTLRIQLELSQ 1574

  Fly  1697 ELWRYSRDPIKAPLLRKLQSKEEFA-------EEACFAFAAIL---------------KYMGDLP 1739
                     :||.:.|||..|:|..       :.|..:..|.|               |..|||.
  Rat  1575 ---------VKAEVDRKLAEKDEECTNLRRNHQRAVESLQASLDAETRARNEALRLKKKMEGDLN 1630

  Fly  1740 SKRPRMGN--------EITDHIFDGPLKHEIL-RDEIYCQLMKQLTDNRNRMSEERGWELMWLAT 1795
            ....::|:        :....:....||.|.. |||                 |:|      ||.
  Rat  1631 DLELQLGHATRQAMEAQAATRLLQAQLKEEQAGRDE-----------------EQR------LAA 1672

  Fly  1796 GLFACSQGLLKELLLFLRTRRHPISQDSMHRLQKTIRHGQR 1836
            .|....|.|         .||..:....:..|:..:..|:|
  Rat  1673 ELREQGQAL---------ERRAALLASELEELRAALEQGER 1704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 287/713 (40%)
MYSc_Myo7 77..721 CDD:276832 279/688 (41%)
MyTH4 <1138..1245 CDD:214535 25/123 (20%)
B41 1251..1467 CDD:214604 41/244 (17%)
FERM_B-lobe 1355..1439 CDD:271216 12/83 (14%)
FERM_C1_MyoVII 1461..1559 CDD:270019 18/97 (19%)
SH3 1560..1624 CDD:302595 10/63 (16%)
MyTH4 1701..1849 CDD:214535 33/167 (20%)
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
Myh7bNP_001101264.2 Myosin_N 32..71 CDD:397036 11/40 (28%)
myosin head (motor domain) 86..773 284/700 (41%)
MYSc_Myh7b 98..773 CDD:276953 279/688 (41%)
Myosin_tail_1 853..1930 CDD:396244 213/1153 (18%)
myosin tail 1075..1933 150/840 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.