DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and Myo10

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:XP_008758990.2 Gene:Myo10 / 310178 RGDID:1307193 Length:2060 Species:Rattus norvegicus


Alignment Length:2370 Identity:629/2370 - (26%)
Similarity:1034/2370 - (43%) Gaps:555/2370 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GDYIWIEPASGREFDVAIGARVVSAEGRRIQVRDDDGDEVWLAPE-----RRIKAMHASSVQGVE 66
            |..:|:. .:|:.|...:.:   .|||  :.|...|..:|:...:     :::.|||....:||:
  Rat     8 GARVWLR-ENGQHFPSTVNS---CAEG--VVVFQTDYGQVFTYKQSTITNQKVTAMHPLHEEGVD 66

  Fly    67 DMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQ-ILPIYTGDQIKLYKERKIGELPP 130
            ||.||.:||...|:.||..|||.|.||||.|||:.:||||| |..:|....::.|....:|||||
  Rat    67 DMASLTELHGGSIMYNLFQRYKRNQIYTYIGSIIASVNPYQPIAGLYERATMEQYSRCHLGELPP 131

  Fly   131 HIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAIS---------GKHSWIEQQ 186
            |||||.:..|..:.:...:||::|||||||||||||||||::|:.||         .|.|.:||.
  Rat   132 HIFAIANECYRCLWKRHDNQCVLISGESGAGKTESTKLILKFLSVISQHSLDLCLQEKSSSVEQA 196

  Fly   187 ILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYH 251
            ||:::||:||||||||:.|:|||||||::.::....|.|:|.:|..|||||:|:|.||..|||||
  Rat   197 ILQSSPIMEAFGNAKTVYNNNSSRFGKFVQLNICQKGNIQGGRIVDYLLEKNRVVRQNPGERNYH 261

  Fly   252 VFYCILAGLSADEKSRLDLGMAADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEI 316
            :||.:||||...|:....|.:..:|.||........:...|...|..:..||:|:.||.:|:.|:
  Rat   262 IFYALLAGLDQGEREEFYLSLPENYHYLNQSGCTEDKTISDQESFRQVIEAMEVMQFSKEEVREV 326

  Fly   317 IKLLAALLHCGNIKYKATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTLFAHGETVV 381
            ::|||.:||.|||::...     ...:|.....:.|.|.||||....|.||||:|::|..||.::
  Rat   327 LRLLAGILHLGNIEFITA-----GGAQISFKTALGRSAELLGLDPTQLTDALTQRSMFLRGEEIL 386

  Fly   382 STLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAI-----FKPRGTSRNAIGVLDIFGFENFDQN 441
            :.||..|:||.||:....:|.|.|..:::|||:.|     ||       :||:|||||||||:.|
  Rat   387 TPLSVQQAVDSRDSLAMALYARCFEWVIKKINSRIKGKDDFK-------SIGILDIFGFENFEVN 444

  Fly   442 SFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIMALIDE 506
            .||||.||||||.||::|.:|||.|||.||:.|.:.|:.|:::||.:.||||. |:|.::|||:|
  Rat   445 HFEQFNINYANEKLQEYFNKHIFSLEQLEYSREGLVWEDIDWIDNGECLDLIE-KKLGLLALINE 508

  Fly   507 EARFPKGTDQTMLAKLHKTHGSHKNYLKPKSDINTSFGLNHFAGVVFYDTRGFLDKNRDTFSPDL 571
            |:.||:.||.|:|.|||..|.::..|:||:..:| :||:.|:||.|.||.||.|:||||||..||
  Rat   509 ESHFPQATDSTLLEKLHNQHANNHFYVKPRVAVN-NFGVKHYAGEVQYDVRGILEKNRDTFRDDL 572

  Fly   572 LHLVSQSTNKFLRQIFA-------QD-IEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQPFFIR 628
            |:|:.:|...|:..:|.       || ::.|::.|:  ||:|:||:.||.:||.||||..|||:|
  Rat   573 LNLLRESRFDFIYDLFEHISSRNNQDTLKCGSKHRR--PTVSSQFKDSLHSLMATLSSSNPFFVR 635

  Fly   629 CIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAHRTD 693
            |||||..|.|..||:.:...|||||||:||:|||:|||.:|..|::|.:||:.|:..:  |...|
  Rat   636 CIKPNTQKMPDQFDQAVVLNQLRYSGMLETVRIRKAGYAVRRPFQDFYKRYKVLMRDL--ALPED 698

  Fly   694 CQAATSRICAVVL-----GKSDYQLGHTKVFLKDAHDLFLEQERDRVLTRKILILQRSIRGWVYR 753
            .:..    |.|:|     ..|::|||.|||||:::.:..||:.|:..:.|..::::..|.|::.|
  Rat   699 IRGK----CTVLLQFYDASNSEWQLGKTKVFLRESLEQKLEKRREEEIDRAAMVIRAHILGYLAR 759

  Fly   754 RRFLRLRAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIRSRVLSHRFRHLRGHIVGLQ----- 813
            :::.::....:|:|:.::.:..|||:.:::...:..|..:|.|:....:|.|......|:     
  Rat   760 KQYRKVLCGVVTIQKNYRAFLARKRFLHLKKAAIVFQKQLRGRLARKVYRQLLAEKRELEERKRL 824

  Fly   814 ---------------AHARGYLVRREY---GHKMWAVIKIQSHVRRMIAMRRYRKLRLEHKQFAE 860
                           |.....|:|.:.   ..|...:..:|.:.|.....|...|.| |:||..|
  Rat   825 EEEKKREEEERERKRAQREADLLRAQQEAETRKQQELEALQKNQREADLTRELEKQR-ENKQVEE 888

  Fly   861 VLQLRK-------LEEQELLHRGNKHAREIAEQHYRD----RLHELERREIQEQLENR------- 907
            :|:|.|       ::||:.|.......:::  |..||    ||.:...|..||.||:.       
  Rat   889 ILRLEKEIEDLQRMKEQQELSLTEASLQKL--QQLRDEELRRLEDEACRAAQEFLESLNFDEIDE 951

  Fly   908 --RRVEVNMNI---------------------INDAARKQEEPVDDGKLVEAMFDFLPDSSSDAP 949
              |.:|.::::                     .|.:....||.||:|      |:...|:..|:|
  Rat   952 CVRNIERSLSVGSEISGELSELAENASGEKPNFNFSQPYPEEEVDEG------FEADDDAFKDSP 1010

  Fly   950 TP----HGGRETSVFNDLPHAQNVNQDD-----IIAPIHISEDEEDLSEFKFQKFAATYFQGNVN 1005
            .|    |..:.||   .:..:.:.:::|     .:.|...|.|...|.....|..|:.:...:..
  Rat  1011 NPSEHGHSDQRTS---GIRTSDDSSEEDPYMNYTVVPTSPSADSTVLLAASVQDSASLHNSSSGE 1072

  Fly  1006 HQYAKKALKHPLLPLHTQGDQLAAQALWITILRFTGDMPEP--KY-HTMDRMDTTSVMSKVTATL 1067
            ..|.        :|.:                  .||:|.|  .| :..|..:..::.|..:.|.
  Rat  1073 STYC--------MPQN------------------NGDLPSPDGDYDYDQDDYEDGAITSGSSVTF 1111

  Fly  1068 GRNFIRSKEFQEAQLMGLDPDAFLKQKPRSIRHKLVSLTLKRKNKLG------EDVRRRLQDDEY 1126
            ..::  ..::        .||         .|:.:.:.     |..|      |..:...:|.|.
  Rat  1112 SNSY--GSQW--------SPD---------YRYSVGTY-----NSSGAYRFSSEGAQSSFEDSEE 1152

  Fly  1127 TADSYQSWLQSRPTSNLEKLHFIIGHGILRAELRDEIYCQICKQL--------TNNPLKSSHARG 1183
            ..|       ||..:: ::|.:          .||.:|.  |..|        ....|.:|..|.
  Rat  1153 DFD-------SRFDTD-DELSY----------RRDSVYS--CVTLPYFHSFLYMKGGLMNSWKRR 1197

  Fly  1184 WILLSLCVGCFAPSEKFVNYLRAFIREGPPGYAPYCEERLKRTF----NNGT-----RNQPPSWL 1239
            |        |....|.|: :.|:            .:|.||:.:    ..|:     ||....|.
  Rat  1198 W--------CVLKDETFL-WFRS------------KQEALKQGWLHKKGGGSSTLSRRNWKKRWF 1241

  Fly  1240 ELQATKSKKPIMLPITFMDGNTKTLLADS--ATTARELCNQLSDKISLKDQFGFSLYIALFDKVS 1302
            .|:.:|        :.:.:.:::..|..:  ..:|:|:.:      :...:.|..:.:|      
  Rat  1242 VLRQSK--------LMYFENDSEEKLKGTVEVRSAKEIID------NTNKENGIDIIMA------ 1286

  Fly  1303 SLGSGGDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEIFAPWHEPT-------HDQVATNLIY 1360
                  |.....|::..:.|.:         |     ..:.:..|..|       ||:.|..   
  Rat  1287 ------DRTFHLIAESPEDASQ---------W-----FSVLSQVHSSTDQEIREMHDEQANP--- 1328

  Fly  1361 QQVVRGVKFG--EYRC-----DKEEDLAMIAAQQYF-IEYSTDMSMERLFTLLPNFIPDFCLSGV 1417
            |..|..:..|  :..|     |:.....:|.|.:.. ....|...|....|||.....|..:.|.
  Rat  1329 QNAVGTLDVGLIDSVCASDSPDRPNSFVIITANRVLHCNADTPEEMHHWITLLQRSKGDTRVEGQ 1393

  Fly  1418 DKAIERWAALVLQAYKKSYYVKDKIAPLKIKEDIVSYAKYKWPLLFSRFYEAYRNSGPNLPKNDV 1482
            :..:..|       ..|......|::.||:|:        :|.:|.....:.|::|..|..|...
  Rat  1394 EFIVRGW-------LHKEVKNSPKMSSLKLKK--------RWFVLTHNSLDYYKSSEKNALKLGT 1443

  Fly  1483 IIAVNWTGVYVVDDQEQVLLELSFPEITAVSSQKTNKVFTQTFSLSTVRGEEFTFQSPNAEDIRD 1547
            ::..:...  ||...|::..|..:..:|....:...:::|:.                       
  Rat  1444 LVLNSLCS--VVPPDEKIFKETGYWNVTVYGRKHCYRLYTKL----------------------- 1483

  Fly  1548 LVVYFLDGLKKRSKYVIALQ---DYRAPSDGTSFLSFFKGDLIILED--ESCGESVLNNGWCIGR 1607
                    |.:.:::..|:|   |.:||.|..:        ..:::|  |:|..|.:        
  Rat  1484 --------LNEATRWSSAIQNVTDTKAPIDTPT--------QQLIQDIKENCLNSDV-------- 1524

  Fly  1608 CDRSQERGDFPAETVYVL--PTLSKPPQDILALFNIEEAHHGRRLSMASNGGAVEPRDRPHTLME 1670
            .::..:|......|.:.|  |.|..|..||             .|::..:.|..       ||.:
  Rat  1525 VEQIYKRNPILRYTHHPLHSPLLPLPYGDI-------------NLNLLKDKGYT-------TLQD 1569

  Fly  1671 YALDHFR-LPPKRTMSKTLTLSSKRSEELWRYSRDPIKAPLLRKLQSKEEFAEEACFAFAAILKY 1734
            .|:..|. |....:||                  |||  |:::                 .||:.
  Rat  1570 EAIKIFNSLQQLESMS------------------DPI--PIIQ-----------------GILQT 1597

  Fly  1735 MGDLPSKRPRMGNEITDHIFDGPLKHEILRDEIYCQLMKQL--TDNRNRMSEERGWELMWLATGL 1797
            ..||   ||                   ||||:||||:||.  ..:...:.....|:::...:..
  Rat  1598 GHDL---RP-------------------LRDELYCQLIKQTNKVPHPGSVGNLYSWQILTCLSCT 1640

  Fly  1798 FACSQGLLKELLLFLRTRRHPISQDSMHR--------LQKTIRHGQRKYPPHQVEVEAIQHKTTQ 1854
            |..|:|:||.|...|:..|.......|.:        |:||   ..|::.|.:.|:||:.|: .:
  Rat  1641 FLPSRGILKYLKFHLKRIREQFPGTEMEKYALFIYESLKKT---KCREFVPSRDEIEALIHR-QE 1701

  Fly  1855 IFHKVYFPDDTDEAFEVDSSTRAKDFCNNISQRLSLRTSEG-FSLFVKIADKVISVPEGDFFFDF 1918
            :...||..........::|.|.|.:....:.:.|::..|.. |:||........::.......|.
  Rat  1702 MTSTVYCHGGGSCKITINSHTTAGEVVEKLIRGLAMEDSRNMFALFEYNGQVDKAIESRTIVADV 1766

  Fly  1919 VRHLTDWIKKARPIRDGANP-QFTYQVFFMKKLWTNTVPGKDRNADLIFHYHQELPKLLRGYHKC 1982
               |..:.|.|.....|..| :|.::::..  |.|:::| || :.:..|.:.|....::.|:|..
  Rat  1767 ---LAKFEKLAATSEAGDAPWKFYFKLYCF--LDTDSMP-KD-SVEFAFMFEQAHEAVIHGHHPA 1824

  Fly  1983 SREEAAKLAALVFRVRFGE--------------NKQELQA-IPQMLRELIPSDIMKIQSTS---- 2028
            ..|....||||..:...|:              :.|.|:| |.|..:...|.:.::.:.||    
  Rat  1825 PEESLQVLAALRLQYLQGDYTLHTSVPPLEEVYSLQRLKARISQSTKTFTPYERLEKRRTSFLEG 1889

  Fly  2029 -----------------------EW--------KRSIVASYNQDGGMTSEDAKVAFLKIVYRWPT 2062
                                   .|        :.||:..:.:..|::.|.|...::.::..||.
  Rat  1890 TLRRSFRTGTVARQKVEEEQMLDMWIKEEICSARASIIDKWKKLQGVSQEQAMAKYMALIKEWPG 1954

  Fly  2063 FGSAFFEVKQTTEPNYPEMLLIAINKHGVSLIHPVTKDILVTHPFTRISNWSS--GNTYFHMTIG 2125
            :||..|:| :..|..:|:.|.:.::...||:........|....:..|.::.:  .|||     .
  Rat  1955 YGSTLFDV-ECKEGGFPQELWLGVSADAVSVYKRGEGKPLEVFQYEHILSFGAPLANTY-----K 2013

  Fly  2126 NLVRGSKLLCETSLGYKMDDLLTSYISLML 2155
            .:|...:||.|||....:..|:.:|||:::
  Rat  2014 IVVDERELLFETSEVVDVAKLMKAYISMIV 2043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 319/696 (46%)
MYSc_Myo7 77..721 CDD:276832 308/671 (46%)
MyTH4 <1138..1245 CDD:214535 23/123 (19%)
B41 1251..1467 CDD:214604 36/232 (16%)
FERM_B-lobe 1355..1439 CDD:271216 17/91 (19%)
FERM_C1_MyoVII 1461..1559 CDD:270019 12/97 (12%)
SH3 1560..1624 CDD:302595 12/68 (18%)
MyTH4 1701..1849 CDD:214535 38/157 (24%)
B41 1856..2068 CDD:214604 50/263 (19%)
FERM_M 1966..2068 CDD:278785 28/151 (19%)
FERM_C2_MyoVII 2064..2159 CDD:270020 24/94 (26%)
Myo10XP_008758990.2 MYSc 58..739 CDD:214580 320/702 (46%)
MYSc_Myo10 77..727 CDD:276840 308/671 (46%)
IQ 741..763 CDD:197470 4/21 (19%)
SPEC <843..957 CDD:295325 29/116 (25%)
MYO10_CC 882..932 CDD:293340 15/51 (29%)
PH-like 1183..>1225 CDD:302622 11/62 (18%)
PH2_MyoX 1217..1318 CDD:270108 18/140 (13%)
PH 1217..1312 CDD:278594 16/134 (12%)
PH3_MyoX-like 1383..1508 CDD:270109 27/172 (16%)
PH 1398..1497 CDD:278594 21/146 (14%)
MyTH4 1551..1697 CDD:214535 49/227 (22%)
UBQ 1703..>1748 CDD:294102 9/44 (20%)
B41 1706..1960 CDD:214604 50/260 (19%)
FERM_M 1801..1960 CDD:278785 30/159 (19%)
FERM_C_MyoX 1956..2044 CDD:270023 24/94 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

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