DRSC/TRiP Functional Genomics Resources

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Protein Alignment ck and Myo7a

DIOPT Version :10

Sequence 1:NP_523571.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:XP_006229804.1 Gene:Myo7a / 266714 RGDID:628830 Length:2276 Species:Rattus norvegicus


Alignment Length:160 Identity:35/160 - (21%)
Similarity:57/160 - (35%) Gaps:45/160 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   958 MEHRGYPARAYNLAMLAMKNVQLAYNQDTHPAI------NDIHWACALSHSLGKPELSKMIPLVI 1016
            :|..|||   :....|..:..|..:|.|:..|.      ||.|    |.|.   |..|..:|:  
  Rat   232 LEREGYP---FQQNTLTSQQSQNGHNSDSQSATVSPLGSNDKH----LKHF---PNPSPTVPI-- 284

  Fly  1017 KNVQCATVLS-DILRRCSVPTP-----GLHNFGAHGNNLRQCIKLSYDREPLNQLLEAAVSAYVN 1075
                |.|.:: |........:|     .|.:|....|:  .|:.||   :.::..|..:|.:.:.
  Rat   285 ----CTTTMAPDCASAQDNGSPSALDVSLQDFNVFSND--SCLHLS---DAVSPSLSESVDSPIG 340

  Fly  1076 TTHSRLSHISPRHYSDFIDFLSKARDTFML 1105
            .|            ::..||.|:...|..|
  Rat   341 LT------------TEAFDFFSETLTTIDL 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_523571.1 MYSc_Myo7 77..721 CDD:276832
MyTH4 <1138..1245 CDD:214535
FERM1_F1_Myosin-VII 1249..1347 CDD:340612
B41 1251..1467 CDD:214604
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:473055
MyTH4 1701..1849 CDD:214535
FERM2_F1_Myosin-VII 1854..1951 CDD:340613
B41 1856..2068 CDD:214604
FERM_C2_MyoVII 2064..2159 CDD:270020
Myo7aXP_006229804.1 MYSc_Myo7 140..790 CDD:276832 35/160 (22%)
DUF5401 <835..>991 CDD:375164
MAP7 <918..>996 CDD:461709
MyTH4 1078..1314 CDD:214535
FERM1_F1_Myosin-VII 1318..1416 CDD:340612
B41 1320..1535 CDD:214604
FERM_C1_MyoVII 1529..1665 CDD:270019
SH3_MYO7A 1666..1730 CDD:212814
MyTH4 1808..1957 CDD:214535
FERM2_F1_Myosin-VII 1962..2059 CDD:340613
B41 1964..2176 CDD:214604
FERM_C2_MyoVII 2172..2267 CDD:270020
Blue background indicates that the domain is not in the aligned region.

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