DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and myo52

DIOPT Version :9

Sequence 1:NP_001285949.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:NP_588492.1 Gene:myo52 / 2538846 PomBaseID:SPCC1919.10c Length:1516 Species:Schizosaccharomyces pombe


Alignment Length:1662 Identity:478/1662 - (28%)
Similarity:720/1662 - (43%) Gaps:352/1662 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IVTRGDYIWIEPASGREFDVAIGARVVSAEGRRIQVRDDDGDE--VWLAP-----ERRIKAMHAS 60
            |..:|...||.....:....:|....|..|...:.|:|::.:|  :.:.|     |.|.......
pombe     5 IYYKGLQCWIPDEQSQWIPGSIKDCRVEGEKAFLTVQDENENETVITVKPDDLNYEGRNGLPFLR 69

  Fly    61 SVQG-VEDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILP-IYTGDQIKLYKER 123
            |:.. .:|:..|..|:|..:|..|..||.:..||||:|.:|:||||:|.|| :||.:.::.|.|:
pombe    70 SINSDADDLTDLSYLNEPSVLDALSTRYNQLQIYTYSGIVLIAVNPFQRLPNLYTHEIVRAYSEK 134

  Fly   124 KIGELPPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAI--------SGKH 180
            ...||.||::||.:::|..|.:..::|.|:||||||||||.|.:.|::|.|::        |..|
pombe   135 SRDELDPHLYAIAEDSYKCMNQEHKNQTIIISGESGAGKTVSARYIMRYFASVQALIQSTDSNFH 199

  Fly   181 -----SWIEQQILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRI 240
                 :.:|.:||..|||:|||||:||.||||||||||||.|.|..|..|.||||:.||||:||:
pombe   200 EAPQLTAVENEILATNPIMEAFGNSKTSRNDNSSRFGKYIQILFDGNATIIGAKIQTYLLERSRL 264

  Fly   241 VSQNHSERNYHVFYCILAGLSAD--EKSRLDLGMAADYKYLTGGNSITCEGRDDAAEFSDIRSAM 303
            |.|.:.|||||:||.||||.|::  ||.:| :..:.::.||..||..|.||.:|..||.....|:
pombe   265 VFQPNQERNYHIFYQILAGSSSEQLEKWKL-VENSQEFNYLKQGNCSTIEGVNDKEEFKATVDAL 328

  Fly   304 KVLLFSDQEIWEIIKLLAALLHCGNIKYKATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDAL 368
            |.:...:.....|..|||||||.|||:.|.:   ..||....::.|:.....|||:....|:..|
pombe   329 KTVGIDNDTCECIFSLLAALLHIGNIEVKHS---RNDAYIDSKNENLINATSLLGVDPSSLVKWL 390

  Fly   369 TRRTLFAHGETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIF----KPRGTSRNAIGV 429
            |:|.:....|.::..|:..|:|..||:..|.:|..:|..:|..||.|:.    |...|:::.|||
pombe   391 TKRKIKMASEGILKPLNEFQAVVARDSVAKFLYASLFDWLVATINKALMYSADKSNQTAKSFIGV 455

  Fly   430 LDIFGFENFDQNSFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIA 494
            |||:|||:|.:|||||||||||||.|||.|.:|:||||||||..|.:||.:|::.|||..:.:|.
pombe   456 LDIYGFEHFKKNSFEQFCINYANEKLQQEFYRHVFKLEQEEYAAEGLNWSYIDYQDNQQCISMIE 520

  Fly   495 IKQLNIMALIDEEARFPKGTDQTMLAKLHKTHG--SHKNYLKPKSDINTSFGLNHFAGVVFYDTR 557
             .:|.|::|:|||.|.|..:|:..::||:....  ..||..:.....|..|.:.|:|..|.|...
pombe   521 -SRLGILSLLDEECRMPTNSDENWVSKLNDAFSKPEFKNSYQKSRFGNKEFTIKHYALDVVYCAE 584

  Fly   558 GFLDKNRDTFSPDLLHLVSQSTNKFLRQIFAQDIEMGA--------ETRKRTPTLSTQFRKSLDA 614
            ||:||||||.|.:||.|.:.|...|::.:....:|..|        :|:.::.||.:.|:.||.:
pombe   585 GFIDKNRDTISDELLELFTNSDVPFVKDLVLFRLEQTAPPADTKKIKTKPKSNTLGSMFKSSLVS 649

  Fly   615 LMKTLSSCQPFFIRCIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERY 679
            ||.|::.....:||||||||.|:...||..:...|||..|::|||:|..||:|.|..|.|||.||
pombe   650 LMSTINETNAHYIRCIKPNEEKEAWKFDNQMVVSQLRACGVLETIKISCAGFPSRWTFDEFVSRY 714

  Fly   680 RFLIPGVPPAHRTDCQAATSRICAVVLGK----SDYQLGHTKVFLKDAHDLFLEQERDRVLTRKI 740
            ..|   ||.|.||......|:   .:|.|    :.||:|.||:|.:......||..||:.|....
pombe   715 YML---VPSAVRTTESLTFSK---AILEKHADPTKYQIGKTKIFFRSGVTPLLESARDKALKHAA 773

  Fly   741 LILQRSIRGWVYRRRFLRLRAAAITVQRFWKGYAQRK--RYRNMRVGYMRLQALIRSRVLSHRFR 803
            .:|..:.....||.|||..|....:.|....|:..|:  .|..:....::||:|.|:.:....|.
pombe   774 HLLYEAFAVNYYRTRFLLSRKRVRSFQAVAHGFLSRRHTEYELLSSNIIKLQSLWRTALKRKEFI 838

  Fly   804 HLRGHIVGLQAHARGYLVRREYGHK-----------MWAVIKIQSHVRRM----IAMRRYRKLRL 853
            ..:..|:.:|:..||:|:|:....|           :|...|...|.:.:    :.::...:::|
pombe   839 QTKNSILKVQSIIRGFLLRQTLEEKTKHDATLIIQSLWLTFKAHKHYKELQYYAVRIQSLWRMKL 903

  Fly   854 EHKQFAEVLQLRKLEEQELLH------RGNKHAREIAEQ---------HYRDRLHELE---RREI 900
            ..:|..|:    |:|..:..|      |......||::|         .:|:|:.|||   ....
pombe   904 AKRQLTEL----KIESTKASHLKQVSYRLESRLFEISKQLDNSEQENNKFRERIAELESHLSNYA 964

  Fly   901 QEQLENRRRVEVNMNIINDAARKQEEPVDDGKLVE---------AMFDFLPDSSSDAPTPHGGRE 956
            :.:|...|.:|....:|:|.::       ||:|.|         .|.:......:||.|     |
pombe   965 EAKLAQERELEQTRVLISDQSQ-------DGELKELLEEKENALIMMEEEMRQVNDANT-----E 1017

  Fly   957 TSVFNDLPHAQNVNQDDIIAPIHISEDEEDLSE-----------FKFQKFAATYFQGNVNHQYAK 1010
            ....|....:|..|.|.||.     |....|.|           .|....|::..|...:.:.::
pombe  1018 LLRVNATLKSQLKNYDMIIV-----EQTSQLKEKNRIIASLTKATKILNSASSIEQSRNSEEKSR 1077

  Fly  1011 KALKHPLLPLHTQGDQLAAQALWITILRFTGDMPEPKYHTMDRMDTTSVMSKVTATLGRNFIRSK 1075
            :  ...|:.:.||.:.|...            |.:...|.:|         |:|...||.|...|
pombe  1078 R--DSSLMEMRTQKEMLVLL------------MNDGLKHDLD---------KLTEYAGRTFTTLK 1119

  Fly  1076 EFQEAQLMGLDPDAFLKQKPRSIRHKLVSLTLKRKNKLGEDVRRRLQDDEYTADSYQSWLQSRPT 1140
                                        :|.||     ..||..:..|..:              
pombe  1120 ----------------------------TLLLK-----DNDVEAQKLDHLF-------------- 1137

  Fly  1141 SNLEKLHFIIGHGILRAELRDEIYCQICKQLTNNPLKSSHARGWILLSLCVGCFAPSEKFVNYLR 1205
              |.||.||             |..|:.|.                 :||....|..|:      
pombe  1138 --LAKLLFI-------------IISQMWKS-----------------NLCQESVALVER------ 1164

  Fly  1206 AFIREGPPGYAPYCEERLKRTF-NNGTRNQPPSWLELQATKSKKPIMLPITFMDGNTKTLLADSA 1269
                        ||...|:..| ...:.|:.|.                |.|...||..|||...
pombe  1165 ------------YCVHTLEYVFQKTSSANERPD----------------IGFWVANTHALLAFVY 1201

  Fly  1270 TTARELCNQLSDKISLKDQFGFSLYI--------ALFDKVSSLGSGGDHV----MDAISQCEQYA 1322
            |..:          :.|....|:|..        .:|:.:.|      |:    .:.:.|...:.
pombe  1202 TKQQ----------AFKHSSAFTLLSTESHESVQTIFEMIES------HLSKIFFEWVRQVNNFL 1250

  Fly  1323 K------------EQGAQERNAPWRL-FFRK---------EIFAPWHEPTHDQVATNLIYQQVVR 1365
            |            ...|.:.|...|: ||.|         .:....|:..........||..::|
pombe  1251 KPLIVQAMIITGTNTDAGDENRKLRIKFFEKPKYKITDVIHVLNKVHDSCQAYKVNYEIYNALIR 1315

  Fly  1366 GVKFGEYRCDKEEDLAMIAAQQYFIEYSTDMSMERLFTLLPNF--IPDFCL-SGVDKAIERWAAL 1427
            .:    ||....|     |....||:...  |.:|...:..|:  :.|:|| |||.:|..:...|
pombe  1316 SI----YRFINVE-----AFNSLFIDERG--SWKRGTNISYNYHVLKDWCLESGVPEAYLQLEEL 1369

  Fly  1428 VLQAYKKSYYVKDKIAPLKIKEDIVSYAKYKWPLLFSRF----YEAY--RNSGPNLPKNDVIIAV 1486
             ||..|...:|||....:....|..:....:...|..|:    |||:  :.:...|.||.|...:
pombe  1370 -LQTSKILQFVKDDPNYVARVRDFYALNFLQIKTLLHRYDYADYEAHVPKKTMSELSKNIVAEGI 1433

  Fly  1487 NWTGVYVVDDQEQVLLEL-------SFPEITAVSSQK 1516
            |        .:||:..|:       ||.|..::...|
pombe  1434 N--------QREQLTYEVLDYRLQDSFEESPSLEKIK 1462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_001285949.1 MYSc 64..733 CDD:214580 290/703 (41%)
MYSc_Myo7 77..721 CDD:276832 284/677 (42%)
MyTH4 <1138..1245 CDD:214535 18/107 (17%)
B41 1251..1467 CDD:214604 52/256 (20%)
FERM_B-lobe 1355..1439 CDD:271216 23/86 (27%)
FERM_C1_MyoVII 1461..1559 CDD:270019 17/69 (25%)
SH3 1560..1624 CDD:302595
MyTH4 1701..1849 CDD:214535
B41 1856..2068 CDD:214604
FERM_M 1966..2068 CDD:278785
FERM_C2_MyoVII 2064..2159 CDD:270020
myo52NP_588492.1 COG5022 1..1501 CDD:227355 478/1662 (29%)
MYSc_Myo5 87..754 CDD:276831 284/677 (42%)
Myo5p-like_CBD_fungal 1105..1434 CDD:271258 90/478 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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