DRSC/TRiP Functional Genomics Resources

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Protein Alignment ck and Myo1g

DIOPT Version :10

Sequence 1:NP_523571.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:XP_006514763.1 Gene:Myo1g / 246177 MGIID:1927091 Length:1039 Species:Mus musculus


Alignment Length:1086 Identity:349/1086 - (32%)
Similarity:533/1086 - (49%) Gaps:158/1086 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 MHASSVQGVEDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYK 121
            :|.:  :|....:||..:...|      :::::..||||.|.:||:|||||.||:|..:.|..|:
Mouse    32 LHCA--EGCSGWLSLLRMAPRG------LKFEKGRIYTYIGEVLVSVNPYQELPLYGPEAIAKYQ 88

  Fly   122 ERKIGELPPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISGKHSWIEQQ 186
            .|::.|.|||::|:.:.||..|||..:|.||||||||||||||::|.|:||:||::......|.:
Mouse    89 GRELYERPPHLYAVANAAYKAMKRRSRDTCIVISGESGAGKTEASKHIMQYIAAVTNPSQRAEVE 153

  Fly   187 -----ILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHS 246
                 :|::..:|||||||:|.||.||||||||:||:|...|...|..|..|||||||::.|:..
Mouse   154 RVKNVLLKSTCVLEAFGNARTNRNHNSSRFGKYMDINFDFKGDPVGGHIHSYLLEKSRVLKQHVG 218

  Fly   247 ERNYHVFYCILAGLSADEKSRLDLGM-AADYKYLTGGNSITCEGRD----DAAEFSDIRSAMKVL 306
            |||:|.||.:|.|....|...|.|.. .|.|.:...|..:.....:    |......:..||:::
Mouse   219 ERNFHAFYQLLRGSEDQELQGLHLERNPAVYNFTRQGAGLNMGVHNALDSDEKSHQGVMEAMRII 283

  Fly   307 LFSDQEIWEIIKLLAALLHCGNIKYKATVVD--NLDATEIPEHINVERVAGLLGLPIQPLIDALT 369
            .||..|:..|.::|||:||.|||::..|..:  .....|:.:...|..||.|...|...::..|.
Mouse   284 GFSPDEVESIHRILAAILHLGNIEFVETEENGPQKGGLEVADEALVGYVAKLTATPRDLVLRTLL 348

  Fly   370 RRTLFAHGETVVS---TLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGT------SRN 425
            .||:.:.|..|:.   |::  ::...|||..|.:|.|:|..:|.||| :|.:||..      ...
Mouse   349 ARTVASGGREVIEKSHTVA--EASYARDACAKAMYQRLFEWVVNKIN-SIMEPRNRDPRCDGKDT 410

  Fly   426 AIGVLDIFGFENFDQNSFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQDAL 490
            .||||||:|||.|..||||||||||.||.|||.|:|.|.|.|||||..|.|.||.||:.:|...:
Mouse   411 VIGVLDIYGFEVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQEEYEREGIAWQTIEYFNNATIV 475

  Fly   491 DLIAIKQLNIMALIDEEARFPKG--TDQTMLAKLHKTHGSHKNY----LKPKSDINTSFG----L 545
            :|:......|:|::| ||....|  ||:..|..|...|..|.:|    |.| :|....||    :
Mouse   476 ELVEQPHRGILAVLD-EACSTAGPITDRIFLQTLDTHHRHHPHYSSRQLCP-TDKTMEFGRDFQI 538

  Fly   546 NHFAGVVFYDTRGFLDKNRDTFSPDLLHLVSQSTNKFLRQIF---AQDIEMGAETRKRTPTLSTQ 607
            .|:||.|.|...||:|||||:...|...|:..|.:..||.::   .|||   .|..||..|..|.
Mouse   539 KHYAGDVTYSVEGFIDKNRDSLFQDFKRLLYNSVDPTLRAMWPDGQQDI---TEVTKRPLTAGTL 600

  Fly   608 FRKSLDALMKTLSSCQPFFIRCIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGF 672
            |:.|:.||::.|:|.:||::|||||||.|.....|...|..|:.|.|::|.:|:||||:..|..:
Mouse   601 FKNSMVALVENLASKEPFYVRCIKPNEDKVAGRLDEAHCRHQVEYLGLLENVRVRRAGFASRQPY 665

  Fly   673 REFVERYRFLIPGVPPAH--RTDCQAATSRICAVVLGKSDYQLGHTKVFLKDAHDLF-LEQERDR 734
            ..|:.||:.......|.|  .:|..|.::.:....| :.|...||:|:|::....|. |||.|.|
Mouse   666 PRFLLRYKMTCEYTWPNHLLGSDRDAVSALLEQHGL-QGDVAFGHSKLFIRSPRTLVTLEQSRAR 729

  Fly   735 VLTRKILILQRSIRGWVYRRRFLRLRAAAITVQRFWKGYAQR-------KRYRNMRVGYMRLQAL 792
            ::...:|:||::.||.:.|....||| |..|:.|:::.:..|       :|::..|...:..:.|
Mouse   730 LIPIIVLLLQKAWRGTLARWHCRRLR-AIYTIMRWFRRHKVRAHLIELQRRFQAARQPPLYGRDL 793

  Fly   793 I-------------RSRVLSHRFRHLR-------GHIVGLQAH--ARGYL--VRREYG-HKMWAV 832
            :             ..|||..|:|..:       ..::.::|.  |.|.|  :|:::| .:.||.
Mouse   794 VWPTPPAVLQPFQDTCRVLFSRWRARQLVKNIPPSDMIQIKAKVAAMGALQGLRQDWGCQRAWAR 858

  Fly   833 IKIQSHVRRMIAMRRYRKLRLEHKQFAEVLQLRKLEEQELLHRG------NKHAREIAEQHYRDR 891
            ..:.|......|..          .|||  ||:.|.|::    |      :.|.|::      :|
Mouse   859 DYLSSDTDNPTASH----------LFAE--QLKALREKD----GFGSVLFSSHVRKV------NR 901

  Fly   892 LHELERREIQEQLENRRRVEVNMNIINDAARKQEEPVDDGKLVEAMFDFLPDSSSDAPTPHGGRE 956
            ..:...|.:               ::.|....:.||....:::.|    :|..:....:...||:
Mouse   902 FRKSRDRAL---------------LLTDRYLYKLEPGRQYRVMRA----VPLEAVTGLSVTSGRD 947

  Fly   957 TSVFNDLPHAQNVNQDDIIAPIHISEDEEDLSEFKFQKFAATYFQGNVNHQYAKKALKHPLLPLH 1021
            ..|   :.|||  ..||::..:|.|:...|....:.....|.:.||.......:.:   ..:||.
Mouse   948 QLV---VLHAQ--GYDDLVVCLHRSQPPLDNRIGELVGMLAAHCQGEGRTLEVRVS---DCIPLS 1004

  Fly  1022 TQGDQLAAQALWITILRFTGDMPEPKYHTMDRMDTTSVMSKVTATL 1067
            .:|      |..:..:....:.|||.:.:          |:.|.||
Mouse  1005 QRG------ARRLISVEPRPEQPEPDFQS----------SRSTFTL 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_523571.1 MYSc_Myo7 77..721 CDD:276832 266/679 (39%)
MyTH4 <1138..1245 CDD:214535
FERM1_F1_Myosin-VII 1249..1347 CDD:340612
B41 1251..1467 CDD:214604
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:473055
MyTH4 1701..1849 CDD:214535
FERM2_F1_Myosin-VII 1854..1951 CDD:340613
B41 1856..2068 CDD:214604
FERM_C2_MyoVII 2064..2159 CDD:270020
Myo1gXP_006514763.1 MYSc_Myo1 52..715 CDD:276829 265/671 (39%)
Myosin_TH1 836..1007 CDD:461801 42/219 (19%)
Blue background indicates that the domain is not in the aligned region.

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