DRSC/TRiP Functional Genomics Resources

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Protein Alignment ck and Myo16

DIOPT Version :10

Sequence 1:NP_523571.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:XP_006508841.1 Gene:Myo16 / 244281 MGIID:2685951 Length:1941 Species:Mus musculus


Alignment Length:1147 Identity:283/1147 - (24%)
Similarity:478/1147 - (41%) Gaps:291/1147 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EDMISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKE---RKIGE 127
            :|:.:|.:|:::.:|..:..|:..:.|:|:.|.|.:.|||::.||||:....::|..   ::...
Mouse   425 DDLATLSELNDSSLLYEIQKRFGNDQIHTFIGDIFLLVNPFKELPIYSTMVSQMYLSPTGQRSPS 489

  Fly   128 LPPHIFAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAA-ISGKHSWIEQQILEAN 191
            ||||:|:..:.|:..:.:.|:.|.|::|||.|:|||:::|.|::||.: .|...:..:.::..|.
Mouse   490 LPPHLFSCAERAFHRLFQERKPQNIILSGERGSGKTQASKQIMKYLTSRASSSCTMFDSRLRHAI 554

  Fly   192 PILEAFGNAKTIRNDNSSRFGKYIDI-------HFSANGVIEGAKIEQYLLEKSRIVSQNHSERN 249
            .|:||||:|||..|:.||...:|.::       |      |.||:|..|:|||||:|:|...:..
Mouse   555 YIVEAFGHAKTTLNNVSSCLIQYWELQCCQRRKH------ITGARISTYMLEKSRVVAQPPGQGT 613

  Fly   250 YHVFYCILAGLSADEKSRLDLGMAADYKYLTGG---NSITCEGRDDAAEFSDIRSAMKVLLFSDQ 311
            :.:|..::.|||::||..|.|.....::|::.|   :..|.|...:....:.::.|:.|:.||..
Mouse   614 FLIFSWLMDGLSSEEKCGLHLNNFCAHRYVSQGMREDVSTAEHSLNKERLAALKHALNVIGFSTL 678

  Fly   312 EIWEIIKLLAALLHCGNIKYKATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTLFAH 376
            |:..:..:|:|:||.|:|::  |.:...|:..:.:...:|:|||:|.:....|..|||....:..
Mouse   679 EVENLFVILSAILHIGDIQF--TALTEADSAFVSDLQLLEQVAGMLQVSTDELASALTTDIQYFK 741

  Fly   377 GETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAI-----FKPRGTSRNAIGVLDIFGFE 436
            |:.::...:...:...||...|.:|.|:|..::..:|..:     :|...|.  .||:|||||||
Mouse   742 GDVIIRRHTIQMAAFYRDLLAKSLYSRLFGFLINTVNCCLQNQDEYKSLQTL--DIGILDIFGFE 804

  Fly   437 NFDQNSFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEFVDNQ-DALDLIAIKQLNI 500
            .|.:|.|||.|:|..||.:..:..:.:|..||.|...|.:..:......|| ..||....|....
Mouse   805 EFQKNEFEQLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAMETACSPGNQAGVLDFFFQKPSGF 869

  Fly   501 MALIDEEARFPKGTDQTMLAKLH-KTHGSHKNYL-KPKSDIN---------TSFGLNHFAGVVFY 554
            .:|:|||::.....:..:..||. ....|:.|.: .|..|.|         .:|.:.|:||.|.|
Mouse   870 FSLLDEESQVIWSGEPNLPRKLQGLLESSNTNAVYSPVKDGNGNVAFKGQGAAFTVMHYAGRVMY 934

  Fly   555 DTRGFLDKNRDTFSPDLLHLVSQSTNKFLRQIFAQDI---------------------------- 591
            :..|.:::|:|:.|.:||.::..|.|..:..:|...:                            
Mouse   935 EMGGAVERNKDSLSQNLLFVMKTSENVVISHLFQSKLSQTGSLISSYPSFKFGGHKSTLLSKRTA 999

  Fly   592 ------------------EMGAET------RKRTPTLSTQFRKSLDALMKTLSSCQPFFIRCIKP 632
                              :.|..|      |....|.::|..|||..:...|....|.||.||||
Mouse  1000 SSMVGVNKNYLELSKLLKKKGTSTFLQRLERGEPATAASQLTKSLADITAKLQRGSPHFILCIKP 1064

  Fly   633 NELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAH----RTD 693
            |..:.|.:||......||:|.|::..:|:.|:|||:|..|.:|:.||.      |.|.    .|.
Mouse  1065 NTSQLPGVFDHFYVSAQLQYLGVLGLVRLFRSGYPVRPSFEDFLSRYE------PLASVLLGETK 1123

  Fly   694 CQAATSRICAVVLGK---SDYQLGHTKVFLKDAH-----DLFLEQERDRVLTRKILILQRSIRGW 750
            .|||..| |.:||.:   ..:|:|..|||||..|     ||:|:      |.|||:..|:.|||:
Mouse  1124 GQAAEER-CRLVLQRCKLQGWQIGVHKVFLKYWHVDQLSDLWLQ------LQRKIVTCQKVIRGF 1181

  Fly   751 VYRRRFLRLRAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIRSRVLSHRFRHLRGHIVGLQAH 815
            :                                                                
Mouse  1182 L---------------------------------------------------------------- 1182

  Fly   816 ARGYLVRREYGHKMWAVIKIQSHVRRM--IAMRRYRKLRLEHKQFAEVLQLRKLEEQELLHRGNK 878
            ||.:|::| ...|...|..|:|.::..  :|::.|..|         |:|               
Mouse  1183 ARQHLLQR-MSIKQQEVTSIKSFLQSTEDMALKTYDAL---------VIQ--------------- 1222

  Fly   879 HAREIAEQH--YRDRLHELERREIQEQLENRRRVE-------VNMN------IINDAARKQEEPV 928
            :|.:||.:|  .|..:|....|..||  |..:|.|       |:.|      :::..|:....|.
Mouse  1223 NASDIAREHDRLRKEVHTAYHRNRQE--EGTKRAEDQGGCRHVHSNSVPVPMVVDSLAQALTGPS 1285

  Fly   929 DDGKLVEAMFDFLPDSSSDAPTPHGGRETSVFNDLPHAQNVNQDDIIAPIHISED---------- 983
            .....:.::|..  |.|:..|:|..........|.....:.:.:.:.|.:..::|          
Mouse  1286 TRPPSLHSVFSM--DDSTGLPSPRKQPPPKPKRDPNTRLSASYEAVSACLSAAKDAAGEALTRPR 1348

  Fly   984 --EEDLSEFK-----------FQKFAATYFQ--------------------GNVNHQYAKK---A 1012
              .:|.|..|           ..|.:.:|.:                    |.::.|:|:.   .
Mouse  1349 PHSDDYSTMKKIPPRKPKRSPHTKLSGSYEEIWGPPRPSGTMGQGGRHQAPGTLSVQWARPDSVP 1413

  Fly  1013 LKHPLLPLH---TQGDQLAAQALWITILRFTGDMPEPKYHTM 1051
            ...|.||||   .|||.              .|..||.|..|
Mouse  1414 QCTPQLPLHLPLPQGDY--------------DDDAEPVYIEM 1441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_523571.1 MYSc_Myo7 77..721 CDD:276832 208/733 (28%)
MyTH4 <1138..1245 CDD:214535
FERM1_F1_Myosin-VII 1249..1347 CDD:340612
B41 1251..1467 CDD:214604
FERM_C1_MyoVII 1461..1559 CDD:270019
SH3 1560..1624 CDD:473055
MyTH4 1701..1849 CDD:214535
FERM2_F1_Myosin-VII 1854..1951 CDD:340613
B41 1856..2068 CDD:214604
FERM_C2_MyoVII 2064..2159 CDD:270020
Myo16XP_006508841.1 ANKYR 81..336 CDD:440430
ANK repeat 114..145 CDD:293786
ANK repeat 147..178 CDD:293786
ANK repeat 180..210 CDD:293786
ANK repeat 243..274 CDD:293786
ANK repeat 276..307 CDD:293786
MYSc_Myo16 436..1153 CDD:276844 208/733 (28%)
NYAP_N 1235..1605 CDD:464717 41/225 (18%)
Blue background indicates that the domain is not in the aligned region.

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