DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ck and Myh6

DIOPT Version :10

Sequence 1:NP_523571.1 Gene:ck / 34882 FlyBaseID:FBgn0000317 Length:2167 Species:Drosophila melanogaster
Sequence 2:XP_006518740.1 Gene:Myh6 / 17888 MGIID:97255 Length:1939 Species:Mus musculus


Alignment Length:2082 Identity:540/2082 - (25%)
Similarity:890/2082 - (42%) Gaps:400/2082 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ASGREFDVA------------IGARVVSAEGRRIQVRDDDGDEVWLAPERRIKAMHASSVQGVED 67
            |..|.||:.            :.|:|||.||.::....::|..|.: .|.::...:......:||
Mouse    26 AQTRPFDIRTECFVPDDKEEYVKAKVVSREGGKVTAETENGKTVTI-KEDQVMQQNPPKFDKIED 89

  Fly    68 MISLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKERKIGELPPHI 132
            |..|..|||..:|.||..||...:||||:|...|.||||:.||:|..:.:..|:.:|..|.||||
Mouse    90 MAMLTFLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNAEVVAAYRGKKRSEAPPHI 154

  Fly   133 FAIGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAIS--GKHS----------WIEQ 185
            |:|.||||.:|...|::|.|:|:||||||||.:||.::||.|:|:  |..|          .:|.
Mouse   155 FSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFASIAAIGDRSKKENPNANKGTLED 219

  Fly   186 QILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNY 250
            ||::|||.|||||||||:||||||||||:|.|||.|.|.:..|.||.|||||||::.|..:||||
Mouse   220 QIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERNY 284

  Fly   251 HVFYCILAGLSADEKSRLDLGMAA----DYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQ 311
            |:||.|   ||..:...||:.:..    ||.:::.| .::....||:.|.....||..||.|:.:
Mouse   285 HIFYQI---LSNKKPELLDMLLVTNNPYDYAFVSQG-EVSVASIDDSEELLATDSAFDVLSFTAE 345

  Fly   312 EIWEIIKLLAALLHCGNIKYKATVVDNL---DATEIPEHINVERVAGLLGLPIQPLIDALTRRTL 373
            |...:.||..|::|.||:|:|....:..   |.||     :.::.|.|:||....|:..|....:
Mouse   346 EKAGVYKLTGAIMHYGNMKFKQKQREEQAEPDGTE-----DADKSAYLMGLNSADLLKGLCHPRV 405

  Fly   374 FAHGETVVSTLSRDQSVDVRDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFGFENF 438
            ....|.|....|..|......|..|.:|.:||..:|.:|| |..:.:...:..||||||.|||.|
Mouse   406 KVGNEYVTKGQSVQQVYYSIGALAKSVYEKMFNWMVTRIN-ATLETKQPRQYFIGVLDIAGFEIF 469

  Fly   439 DQNSFEQFCINYANENLQQFFVQHIFKLEQEEYNHEAINWQHIEF-VDNQDALDLIAIKQLNIMA 502
            |.|||||.|||:.||.|||||..|:|.||||||..|.|.|:.|:| :|.|..:|||. |.:.||:
Mouse   470 DFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLQACIDLIE-KPMGIMS 533

  Fly   503 LIDEEARFPKGTDQTMLAKLHKTH-GSHKNYLKP---KSDINTSFGLNHFAGVVFYDTRGFLDKN 563
            :::||..|||.:|.|..|||:..| |...|:.||   |......|.|.|:||.|.|:..|:|:||
Mouse   534 ILEEECMFPKASDMTFKAKLYDNHLGKSNNFQKPRNVKGKQEAHFSLVHYAGTVDYNIMGWLEKN 598

  Fly   564 RDTFSPDLLHLVSQSTNKFLRQIFAQ-------DIEMGAETRKR---TPTLSTQFRKSLDALMKT 618
            :|..:..::.|..:|:.|.:..:|:.       |...|...:|:   ..|:|...|::|:.||..
Mouse   599 KDPLNETVVGLYQKSSLKLMATLFSTYASADTGDSGKGKGGKKKGSSFQTVSALHRENLNKLMTN 663

  Fly   619 LSSCQPFFIRCIKPNELKKPMMFDRGLCCRQLRYSGMMETIRIRRAGYPIRHGFREFVERYRFLI 683
            |.:..|.|:|||.|||.|.|.:.|..|...|||.:|::|.|||.|.|:|.|..:.:|.:|||.|.
Mouse   664 LKTTHPHFVRCIIPNERKAPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILN 728

  Fly   684 P-GVPPAHRTDCQAATSRICAVVLGKSD-----YQLGHTKVFLKDAHDLFLEQERDRVLTRKILI 742
            | .:|.....|.:....::    ||..|     |:.||||||.|......||:.||..|:|.|..
Mouse   729 PAAIPEGQFIDSRKGAEKL----LGSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSRIITR 789

  Fly   743 LQRSIRGWVYRRRFLRL---RAAAITVQRFWKGYAQRKRYRNMRVGYMRLQALIRSRVLSHRFRH 804
            :|...||.:.|..|.::   |.|.:.:|...:.:...|.:..|:: |.:::.|::|........:
Mouse   790 IQAQARGQLMRIEFKKIVERRDALLVIQWNIRAFMGVKNWPWMKL-YFKIKPLLKSAETEKEMAN 853

  Fly   805 LR---GHIVGL--QAHARGYLVRREYGHKMWAVIKIQSHVRRMIAMRR--------------YRK 850
            ::   |.:...  ::.||    |:|...||.::::.::.::..:...:              ..|
Mouse   854 MKEEFGRVKDALEKSEAR----RKELEEKMVSLLQEKNDLQLQVQAEQDNLNDAEERCDQLIKNK 914

  Fly   851 LRLEH--KQFAEVLQ------------LRKLEEQ--ELLH------------RGNKHAREIAEQH 887
            ::||.  |:..|.|:            .||||::  ||..            ...|||.|...::
Mouse   915 IQLEAKVKEMTERLEDEEEMNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKN 979

  Fly   888 YRDRLHEL---------ERREIQE----QLENRRRVEVNMNIINDAARKQEEPVDDGKLVEAMFD 939
            ..:.:..|         |::.:||    .|::.:..|..:|.:..:..|.|:.|||   :|...:
Mouse   980 LTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDD---LEGSLE 1041

  Fly   940 FLPDSSSDAPTPHGGRETSVFNDLPHAQ-------NVNQDDIIAPIHISEDEEDLSE-FKFQKFA 996
                           :|..|..||..|:       .:.|:.|   :.:..|:..|.| .|.::|.
Mouse  1042 ---------------QEKKVRMDLERAKRKLEGDLKLTQESI---MDLENDKLQLEEKLKKKEFD 1088

  Fly   997 ATYFQGNVNHQYA-----KKALKHPLLPLHTQGDQLAAQ-ALWITILRFTGDMPEPKYHTMDRMD 1055
            .:.....:..:.|     :|.||.....:....::|.|: .....:.:...|:........:|::
Mouse  1089 ISQQNSKIEDEQALALQLQKKLKENQARIEELEEELEAERTARAKVEKLRSDLSRELEEISERLE 1153

  Fly  1056 TTSVMSKVTATLGRNFIRSKEFQEAQLMGLDPDAFLKQKPRSIRHKLVSLTLKRKN-----KLGE 1115
            .....:.|...:.:.  |..|||:   |..|      .:..:::|:..:..|::|:     :|||
Mouse  1154 EAGGATSVQIEMNKK--REAEFQK---MRRD------LEEATLQHEATAAALRKKHADSVAELGE 1207

  Fly  1116 DV---RRRLQDDEYTADSYQSWLQSRPTSNLEKLHFIIGHGILRAELRDEIYCQICKQLTNNPLK 1177
            .:   :|..|..|.....::..|.. .|||:|:        |::|:...|   ::.:.|      
Mouse  1208 QIDNLQRVKQKLEKEKSEFKLELDD-VTSNMEQ--------IIKAKANLE---KVSRTL------ 1254

  Fly  1178 SSHARGWILLSLCVGCFAPSEKFVNYLRAFIREGPPGYAPYCEERLKRTFNNG---TRNQPPSWL 1239
                                |...|..|..:.|.......:..:|.|....||   .:.:....|
Mouse  1255 --------------------EDQANEYRVKLEEAQRSLNDFTTQRAKLQTENGELARQLEEKEAL 1299

  Fly  1240 ELQATKSKKPIMLPITFM------DGNTKTLLADSATTARELCNQLSDKISLKDQFGFSLYIALF 1298
            ..|.|:.|......:..:      :|..|..||.:..::|..|:      .|::|:         
Mouse  1300 ISQLTRGKLSYTQQMEDLKRQLEEEGKAKNALAHALQSSRHDCD------LLREQY--------- 1349

  Fly  1299 DKVSSLGSGGDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEIFAPWHEPTHDQVATNLIYQQV 1363
                      :..|:|.::.::...:  |....|.||..:..:......|           .::.
Mouse  1350 ----------EEEMEAKAELQRVLSK--ANSEVAQWRTKYETDAIQRTEE-----------LEEA 1391

  Fly  1364 VRGVKFGEYRCDKEEDLAMIAAQQYFIEYSTDMSMERLFTLLPNFIPDFCLSGVDKAIERWAALV 1428
            .:  |..:...|.||.:..:.|:        ..|:|:....|.|.|.|..   ||......||..
Mouse  1392 KK--KLAQRLQDAEEAVEAVNAK--------CSSLEKTKHRLQNEIEDLM---VDVERSNAAAAA 1443

  Fly  1429 LQAYKKSYYVKDKI-APLKIK-----EDIVSYAKYKWPLLFSRF------------YEAYRNSGP 1475
            |...::::   ||| |..|.|     .::.|..|....|....|            .|.::....
Mouse  1444 LDKKQRNF---DKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENK 1505

  Fly  1476 NLPK--NDVIIAVNWTGVYVVD--------DQEQVLLELSFPEITAVSSQKTNKVFTQTFSLSTV 1530
            ||.:  :|:...:...|..|.:        :.|::.|:.:..|..|....:..|:.......:.:
Mouse  1506 NLQEEISDLTEQLGEGGKNVHELEKIRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQI 1570

  Fly  1531 RGEEFTFQSPNAEDIRDLVVYFLDGLKKRSKYVIALQ-----DYRAPSDGTSFLSFFKGDLIILE 1590
            :.|   .:...||...::.    ...:...:.|.:||     :.|:.::........:|||..:|
Mouse  1571 KAE---IERKLAEKDEEME----QAKRNHLRMVDSLQTSLDAETRSRNEALRVKKKMEGDLNEME 1628

  Fly  1591 DE--------SCGESVLNNGWCIGR-----CDRSQERGDFPAETVYVLP----TLSKPPQDILAL 1638
            .:        |..:..|.|.....:     .|.:....|...|.:.::.    .|....:::.|:
Mouse  1629 IQLSQANRIASEAQKHLKNSQAHLKDTQLQLDDAVHANDDLKENIAIVERRNNLLQAELEELRAV 1693

  Fly  1639 FNIEEAHHGRRLSMASNGGAVEPRDRPHTLMEYALDHFRLPPKRTMSKTLTLSSKRSEELWRYSR 1703
              :|:....|:|:...   .:|..:|...|  ::.:...:..|:.|...||......||      
Mouse  1694 --VEQTERSRKLAEQE---LIETSERVQLL--HSQNTSLINQKKKMESDLTQLQTEVEE------ 1745

  Fly  1704 DPIKAPLLRKLQSKEEFAEEA---CFAFAAILKYMGDLPSKRPRMGNEITDHIFDGPLKHEILRD 1765
                  .:::.::.||.|::|   ....|..||...|..:...||...:...|.|  |:|.:...
Mouse  1746 ------AVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKD--LQHRLDEA 1802

  Fly  1766 EIYC------QLMK-----QLTDNRNRMSEERGWELMWLATGLFACSQGLLKELLLFLRTRRHPI 1819
            |...      ||.|     :..:|.....::|..|.:   .|: ..|:..:|||     |.:...
Mouse  1803 EQIALKGGKKQLQKLEARVRELENELEAEQKRNAESV---KGM-RKSERRIKEL-----TYQTEE 1858

  Fly  1820 SQDSMHRLQKTIRHGQRKYPPHQVEV-EAIQHKTTQI--FHKVYFP-DDTDEAFEVDSS----TR 1876
            .:.::.|||..:...|.|...::.:. ||.:...|.:  |.||... |:.:|..::..|    .|
Mouse  1859 DKKNLMRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHELDEAEERADIAESQVNKLR 1923

  Fly  1877 AK 1878
            ||
Mouse  1924 AK 1925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ckNP_523571.1 MYSc_Myo7 77..721 CDD:276832 279/683 (41%)
MyTH4 <1138..1245 CDD:214535 18/109 (17%)
FERM1_F1_Myosin-VII 1249..1347 CDD:340612 14/103 (14%)
B41 1251..1467 CDD:214604 41/239 (17%)
FERM_C1_MyoVII 1461..1559 CDD:270019 16/119 (13%)
SH3 1560..1624 CDD:473055 14/81 (17%)
MyTH4 1701..1849 CDD:214535 34/162 (21%)
FERM2_F1_Myosin-VII 1854..1951 CDD:340613 9/32 (28%)
B41 1856..2068 CDD:214604 9/28 (32%)
FERM_C2_MyoVII 2064..2159 CDD:270020
Myh6XP_006518740.1 Myosin_N 32..76 CDD:460670 10/44 (23%)
MYSc_class_II 99..768 CDD:276951 279/683 (41%)
Myosin_tail_1 848..1925 CDD:460256 218/1241 (18%)
Blue background indicates that the domain is not in the aligned region.

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