Protein Alignment Su(H) and cbf12

DIOPT Version :10

• Sequence 1: NP_476868.1
• Gene: Su(H) / 34881
• FlyBaseID: FBgn0004837
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_588358.1
• Gene: cbf12 / 2539119
• PomBaseID: SPCC1223.13
• Length: 963
• Species: Schizosaccharomyces pombe
• Alignment Length: 647
• Identity: 138/647 - (21%)
• Similarity: 227/647 - (35%)
• Gaps: 191/647 - (29%)

  Fly     1 MKSYSQFNLNAAAPPA---IAYETTVVNPNGSPLDPHQQQQQQSQDMPHFGLPGPQPPSSQQQQQ 62
            :..|.....|.::|.:   ..|..:|  |.|:..:..:...|...::.::    .|.||......
pombe   309 LNDYQAAQSNISSPSSRFPTPYSPSV--PFGTYQEKEKSYSQDHAELSYY----QQSPSMMPPYD 367

  Fly    63 QLQVHHQQQQQQQQQQQQQQHQQQMQM---SLLPGPYRPHIEEKKL-TRDAMEK--YMRE----- 116
            :..|:.||...:.....|...|....:   |::|..|....|:..| .:|:..|  |.:.
pombe   368 RSSVYFQQPLSRTDVPNQSFQQYPTTVDGGSMIPNLYPTSAEQMGLYPQDSQNKDTYPKSLVNRP 432

  Fly   117 --------RNDMVIVILHAK---------------------------VAQKSYGNEKRFFCPPPC 146
                    |||.:.::::::                           :.|||||.|:|:.|||..
pombe   433 SSAVCEPARNDSIPMMVYSQPVTIEQRIQYVLSNCHCLSAFYLCMPSLCQKSYGTERRYLCPPIV 497

  Fly   147 IYLFGSGWRRRYEEMLQQGEGEQGAQLCAFIGIGSSDQDMQQLDLNGKQYCAAKTLFISDSDKRK 211
            :||.|:.|.....:.|     :..||..       .|:|..:...|...|.|...|...::|..|
pombe   498 LYLLGTTWLNNVTDNL-----KISAQTL-------EDKDNPKFAKNIFYYNADGALISPETDIAK 550

  Fly   212 ---------------------HFMLSVKMFYGNGHDIGVFNSK------------------RIKV 237
                                 :.:|....:.|.|.:.|...|.                  |:.|
pombe   551 STYQLTNYNENTNFDSFPVWGNALLKTIYYTGQGKNDGFGRSTFLQLSVQSKTKYFKLENLRLGV 615

  Fly   238 ISKPSKKKQSLKNADLCIASGTNVALFNRLRSQTVSTRYLHVEN----------------GHFHA 286
            |||||:|:..:|.:|:.|..|..|.||||.|:|..:..:|...|                .:|..
pombe   616 ISKPSQKRALMKVSDMSIRHGDCVCLFNRYRAQHNNALFLGTSNVQRAISKVSLNMKYNSNYFPT 680

  Fly   287 ----------------SSTQWGAFTIHLLDD-------NESESEEFQVRDGYIHYGATVKLVCSV 328
                            ::..|..|.|..:|:       |.|:|     |...:.....:.||..:
pombe   681 TDAPNDAENEGAGLAMANNLWEPFYIFSVDELNKGNNSNPSDS-----RSKVLCSNMVIILVSKI 740

  Fly   329 TGMALPRLIIRKVDKQMALLEADDP---VSQLHKCAFYMKDTDR-MYLCLSQEKIIQFQATPC-- 387
            ||:..|.||::|.|.....|.:..|   ::.|.|.||...:|.| :|:...|...|.|.:...
pombe   741 TGVQSPPLILKKHDNWKVSLSSRAPSEAINCLSKLAFQCHETKRFLYIDEKQSSEISFTSGELEY 805

  Fly   388 --PKEPNK---EMINDGACWTIISTDKAEYQFY-EGMGPVASPVTP-VPIVNSLNLNGGGDVAML 445
              |.:|.|   .::...|.|:||||......|| |.:...|..|.| :|.|..:.|:   :.:|.
pombe   806 SDPNDPTKATHSVLPWSAMWSIISTQSVRTMFYNEPIHQNAFHVVPSMPFVKFIRLD---ENSMF 867

  Fly   446 ELSGDNFTPHLQVWFGDVEAET-------------------------MYRCTETLLCVVPEI 482
            .:.|..|...:|:|......|.                         :|.||..|:.::.||
pombe   868 HIYGTGFANDVQIWMAYTRCEVKSINAFKPDTTLPPDIISDSRFSSRVYACTANLIELICEI 929

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Su(H)	NP_476868.1	LAG1-DNAbind	122..252	CDD:462735	39/195 (20%)
		BTD	280..402	CDD:462734	35/171 (20%)
		IPT_RBP-Jkappa	424..520	CDD:238581	17/85 (20%)
cbf12	NP_588358.1	LAG1-DNAbind	473..630	CDD:462735	39/168 (23%)
		BTD	690..825	CDD:462734	33/139 (24%)