DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-c and yellow-e3

DIOPT Version :10

Sequence 1:NP_523570.3 Gene:yellow-c / 34879 FlyBaseID:FBgn0041713 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_650288.1 Gene:yellow-e3 / 41651 FlyBaseID:FBgn0038150 Length:409 Species:Drosophila melanogaster


Alignment Length:445 Identity:117/445 - (26%)
Similarity:201/445 - (45%) Gaps:67/445 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LMVCLIGAFSRIASAKLEEK-----FSWKQLAFDWPTPEAEAEAKSNGHYIVENNLPLGVERWQN 70
            ::|.|:..|..:....|..|     ..|..|:.      .:..:|.|....|:.::..| :..::
  Fly     1 MLVVLLALFCAVQGQALVLKELHTLHQWTNLSL------GDDLSKGNRFLPVDVDIEYG-DEGRH 58

  Fly    71 RIFVTVPRWKAGVAATLNYI--DINSTEKSPKLHPYPSWEANKLPIDVQPQDQKTPSGGRLDADK 133
            |.|:|:||.......||..:  :.|...::|:|.|||:.|.:..|                    
  Fly    59 RTFLTIPRLGMATPFTLATVIAEHNELVENPRLEPYPNEEWHVPP-------------------- 103

  Fly   134 AQDAGIQLKDNSTVISTFRIQVDVCDRLWVLDTGLADILGSPKQITPNSILVFDLKTDTLLRRFT 198
                    .:.|.:.|..|..:|.|.||||:|:|..:.|    |:.|..||.|||..|.|::|..
  Fly   104 --------NNCSGITSAIRTYIDECWRLWVVDSGQVNSL----QLCPPQILTFDLVKDELVQRHA 156

  Fly   199 IPADQ-TKEDSFFANIVVD-ADR---SECQDAFAYIPDLGAYGVIVYSLRNDKSYRVKHNFFHFD 258
            :|.|. ....|.|..:||| |:|   :.|....|||.|...||:||:.....:|:|::|......
  Fly   157 LPPDSYIPSVSIFTALVVDLAERGTPNRCVGGRAYIADAWGYGLIVFDSLTGRSWRIEHESMKPS 221

  Fly   259 PLHGDFNVG-GVNFQWTDGVFGLAVGPMNPDHSKDIYFHALASTKEFKVSNRVLQNESHVTAGDS 322
            ||   ..:| ..|.|  .|:|.:::.|...: .:.:|||.|.|..|.:|...::.||:...:.::
  Fly   222 PL---LRLGRSSNSQ--AGIFTVSLSPSEVE-DRFLYFHTLNSFNEMRVPLSLINNETFWKSANA 280

  Fly   323 YYD-FKYVGDRGMNGQSTAEVFDPETGVIFYTQVNKDAIACWNIK-RPYTPDTQGLIDSDSHTLV 385
            ..| |..:|.||:  |..:||.| ::|.::.:.::..|:..|... ..||.|...::..:.|.:.
  Fly   281 SRDSFHSLGTRGI--QCESEVMD-QSGNLYCSLISLGALVKWEESVSNYTADDLRVVAYNPHKIK 342

  Fly   386 FPNDMKID----NEGTIWVLSDKMPTYLYKELDPSAVNYRILMGQNRDLIKGTPC 436
            |...:||:    .|..:|.||.:...::..:|..:.|.::|:..:..||:..|||
  Fly   343 FVTGLKINRNSKGEEELWALSSQPKLFVGGDLPANEVKFQIIGCRTADLLANTPC 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-cNP_523570.3 MRJP 148..436 CDD:308585 88/299 (29%)
yellow-e3NP_650288.1 MRJP 110..397 CDD:308585 88/299 (29%)

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