DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-c and yellow-f2

DIOPT Version :9

Sequence 1:NP_001285947.1 Gene:yellow-c / 34879 FlyBaseID:FBgn0041713 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster


Alignment Length:475 Identity:170/475 - (35%)
Similarity:253/475 - (53%) Gaps:77/475 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LMVCLIGAFSRIASAKLE---EKFSWKQLAF--------------DWP----------------- 41
            |::.||.....::.|..:   |.|.|||:.|              |.|                 
  Fly     7 LILSLISGLQLLSLADADPMIEVFRWKQMDFYNRGDGHLSSGGRKDRPSFSAPVVFPGKYSRRKR 71

  Fly    42 -------TP---EAEAEAKS-NGHYIVENNLPLGVERWQNRIFVTVPRWKAGVAATLNYIDI--N 93
                   ||   .:.|::.. |..||..||:|:|...::.|:|||:||.:.|:.:||||||:  :
  Fly    72 KIMTSRDTPVVVSSRADSDDPNASYIPYNNVPMGATHFRGRLFVTMPRRRVGIPSTLNYIDLAED 136

  Fly    94 STEKSPKLHPYPSWEANKLPIDVQPQDQKTPSGGRLDADKAQDAGIQLKDNSTVISTFRIQVDVC 158
            .:.:||||..||::..|:.....:                            .::|.:|..||.|
  Fly   137 GSNRSPKLRAYPNFALNQFNASAE----------------------------NLVSVYRTSVDAC 173

  Fly   159 DRLWVLDTGLADILGSPKQITPNSILVFDLKTDTLLRRFTIPADQTKEDSFFANIVVDADRSECQ 223
            .|||.:|||:.:...:.:||...||.|.||.||.:|:||.:|....:.....|:|.||....:|.
  Fly   174 QRLWFIDTGMLEYPNNRQQIRRPSIWVVDLATDQVLKRFDVPESIAETGRGLASITVDVKAGQCG 238

  Fly   224 DAFAYIPDLGAYGVIVYSLRNDKSYRVKHNFFHFDPLHGDFNVGGVNFQWTDGVFGLAVGPMNPD 288
            ||:||||||....:.||.||||:.:..:||:|:||||.||.::||..|:|.||:|.:.:|....|
  Fly   239 DAYAYIPDLVYRRLYVYHLRNDRIWSFEHNYFNFDPLSGDLSIGGQTFRWDDGIFSITLGAQKLD 303

  Fly   289 HSKDIYFHALASTKEFKVSNRVLQNESHVTAGDSYYDFKYVGDRGMNGQSTAEVFDPETGVIFYT 353
            .|:|.|||.:|||.||.|||||||.||:....|...||:.:|.||.:.|||...:||.|||||:.
  Fly   304 GSRDAYFHPMASTNEFVVSNRVLQQESNAARSDHGNDFRVLGSRGPSTQSTMHAYDPGTGVIFFD 368

  Fly   354 QVNKDAIACWNIKRPYTPDTQGLIDSDSHTLVFPNDMKIDNEGTIWVLSDKMPTYLYKELDPSAV 418
            ::.::.:.||...:|.:.:..|.:||::..:::|:|:.||.:|||||:|:.||.::|..||.|..
  Fly   369 EIQRNGVGCWKTSKPISAENYGSVDSNAEDMIYPSDLSIDEDGTIWVMSNSMPIFIYSTLDTSIY 433

  Fly   419 NYRILMGQNRDLIK-GTPCE 437
            |:|| ..|...|.| ||.||
  Fly   434 NFRI-WKQKASLAKRGTVCE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-cNP_001285947.1 MRJP 148..436 CDD:281074 126/288 (44%)
yellow-f2NP_650247.1 MRJP 163..451 CDD:281074 126/288 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449198
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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