Protein Alignment yellow-c and Rgn

DIOPT Version :9

• Sequence 1: NP_001285947.1
• Gene: yellow-c / 34879
• FlyBaseID: FBgn0041713
• Length: 438
• Species: Drosophila melanogaster
• Sequence 2: NP_113734.1
• Gene: Rgn / 25106
• RGDID: 3560
• Length: 299
• Species: Rattus norvegicus
• Alignment Length: 285
• Identity: 56/285 - (19%)
• Similarity: 95/285 - (33%)
• Gaps: 83/285 - (29%)

  Fly     8 SLGLMVCLIGAFSRIASAKLEEKFSW------KQLAFDWPTPE------AEAEAKSN-------- 52
            |:...|..:|..:.::|..|.:...:      |..|.:|....      .:.:.|:|
  Rat    44 SISNRVQRVGVDAPVSSVALRQSGGYVATIGTKFCALNWEDQSVFILAMVDEDKKNNRFNDGKVD 108

  Fly    53 --GHY----IVENNLPLGVERWQNRIFVTVPRWKAGVAATLNYIDI-NSTEKS--PKLHPYPSWE 108
              |.|    :.|...|..:||.|..::...|  ...|....:.:|| |..:.|  .|:..|
  Rat   109 PAGRYFAGTMAEETAPAVLERHQGSLYSLFP--DHSVKKYFDQVDISNGLDWSLDHKIFYY---- 167

  Fly   109 ANKLPIDVQPQDQKTPSGGRLDADKAQDAGIQLKDNSTVISTFRIQ-------VDVCDRLWVLDT 166
            .:.|...|...|...|:|             |:.:..||....:.:       :||..:|||
  Rat   168 IDSLSYTVDAFDYDLPTG-------------QISNRRTVYKMEKDEQIPDGMCIDVEGKLWV--- 216

  Fly   167 GLADILGSPKQITPNSILVFDLKTDTLLRRFTIPADQTKEDSF----FANIVVDADRS------- 220
              |...|       ..::..|.:|...|:...:|.|:|....|    ::.:.|...|.
  Rat   217 --ACYNG-------GRVIRLDPETGKRLQTVKLPVDKTTSCCFGGKDYSEMYVTCARDGMSAEGL 272

  Fly   221 ----ECQDAFAYIPDLGAYGVIVYS 241
                :..:.|. |..||..|:..||
  Rat   273 LRQPDAGNIFK-ITGLGVKGIAPYS 296

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
yellow-c	NP_001285947.1	MRJP	148..436	CDD:281074	23/116 (20%)
Rgn	NP_113734.1	SGL	16..264	CDD:285626	48/250 (19%)
		NHL	166..>237	CDD:302697	19/99 (19%)
		WD40 repeat	203..239	CDD:293791	10/47 (21%)
		NHL repeat	203..237	CDD:271320	10/45 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG3386
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900