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Protein Alignment GABA-B-R1 and Atp1b4
DIOPT Version :9
Sequence 1: | NP_001246033.1 |
Gene: | GABA-B-R1 / 34878 |
FlyBaseID: | FBgn0260446 |
Length: | 841 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_445833.2 |
Gene: | Atp1b4 / 84396 |
RGDID: | 620994 |
Length: | 356 |
Species: | Rattus norvegicus |
Alignment Length: | 136 |
Identity: | 28/136 - (20%) |
Similarity: | 57/136 - (41%) |
Gaps: | 27/136 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 706 FAFVALAVIFCCFLSMLLI----FVPKVIEVIRHP----KDKAES-KYNPDSAISKEDEERYQK- 760
|.:.:||.:...|:.||.: ::|...|.::.| :..|.| .:| .:..:.|.:|:
Rat 117 FFYASLAAVITLFIYMLFLAISPYMPTFTEQVKPPGVMIRPFAHSLNFN----FNVSEPETWQRY 177
Fly 761 LVTENEELQRLITQKEEKIRV---LRQRLVERGDA---------KGTELNGATGVASAAVA-TTS 812
:::.|..||......:|::.: ..|..::.||. |.:.|...:|:...... :|.
Rat 178 VISLNGFLQGYNDSLQEEMNIDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTG 242
Fly 813 QPASLI 818
||..|:
Rat 243 QPCILL 248
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3927 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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