DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABA-B-R1 and Gpr156

DIOPT Version :9

Sequence 1:NP_001246033.1 Gene:GABA-B-R1 / 34878 FlyBaseID:FBgn0260446 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_700443.2 Gene:Gpr156 / 239845 MGIID:2653880 Length:798 Species:Mus musculus


Alignment Length:414 Identity:101/414 - (24%)
Similarity:180/414 - (43%) Gaps:65/414 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 VSLPLFVCMCTISSCGIFVAFALIIFNIWNKHRRVIQSSHPVCNTIMLFGVIICLISVILLGI-- 522
            :|..|...|.|..|||:.:....:.|.|..:..|:::.|.|..|.:.|.|..:..||..|.||  
Mouse    45 LSPALLGIMWTFLSCGLLLVLFFLAFTIRCRKNRIVKMSSPNLNVVTLLGSCLTYISAYLFGIQD 109

  Fly   523 --DGRFVSPEEYPKICQARAWLLSTGFTLAYGAMFSKVWRVHRFTTKAKTDPKKKVEPWKLYTMV 585
              :|..|.     .:.|.|..||..|.:|.:|.:..|.||:::..|:...|.:..::..:|..:|
Mouse   110 ALEGSSVE-----ALIQTRLSLLCIGTSLVFGPILGKSWRLYKVFTQRVPDKRVIIKDLQLLGLV 169

  Fly   586 SGLLSIDLVILLSWQIFDPLQRYLETFPLEDPVSTTDDIKIRPELEHCESQRNSMWLGLVYGFKG 650
            :.|:..|:::|::|.:.||:| .|:...:...|:..|..........|.|:.:.:|:.||.|.||
Mouse   170 AALVVADVILLVTWVLTDPIQ-CLQMLGVSMKVTGRDVSCSLTNTHFCASRYSDVWIALVLGCKG 233

  Fly   651 LILVFGLFLAYETRSIKVKQINDSRYVGMSIYNVVVLCLITAPVGMVIA----SQQDASFA---- 707
            |:|::|.:||..|..:....:|.|    ::|...|.|.|:||.:..|:.    |..:..|.    
Mouse   234 LLLLYGAYLAGLTNHVSSPPVNQS----LTIMVGVNLLLLTAGLLFVVTRYLHSWPNLVFGLTSG 294

  Fly   708 --FVALAVIFCCFLSMLLIFVPKV---------IEVIRH-------PKDKAESKYNPDSAISKED 754
              ||....:.||      :|:|::         .:.:||       |......:::.|.:....|
Mouse   295 GIFVCTTTVNCC------VFIPQLKQWKAFEGENQTMRHMAKYFSTPSKSFHGQFDEDPSCHLRD 353

  Fly   755 EER-YQKLVTEN----EELQRLITQKEEKIRVLRQ----------RLVERGDAKGTELNGATGVA 804
            |:. .::|:||.    |.||..::..:||:..|..          .:.:...|:|..|   .|.:
Mouse   354 EKSCMERLLTEKNAVIESLQEQVSNAKEKLVKLMSAECTYDSPEWAVPDAASARGLAL---PGPS 415

  Fly   805 SAAVATTSQPASLINSSAHATPAA 828
            .....:.::..:....|.| .|||
Mouse   416 ECPAVSENESGAAARDSLH-VPAA 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABA-B-R1NP_001246033.1 PBP1_GABAb_receptor 34..437 CDD:107361
ANF_receptor 52..415 CDD:279440
7tm_3 476..730 CDD:278433 70/276 (25%)
Gpr156NP_700443.2 7tm_3 71..>141 CDD:278433 21/74 (28%)
rad18 347..>538 CDD:273165 20/96 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..497
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..666
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..715
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1055
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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