DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABA-B-R1 and Gpr156

DIOPT Version :10

Sequence 1:NP_523569.3 Gene:GABA-B-R1 / 34878 FlyBaseID:FBgn0260446 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_700443.2 Gene:Gpr156 / 239845 MGIID:2653880 Length:798 Species:Mus musculus


Alignment Length:414 Identity:101/414 - (24%)
Similarity:180/414 - (43%) Gaps:65/414 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 VSLPLFVCMCTISSCGIFVAFALIIFNIWNKHRRVIQSSHPVCNTIMLFGVIICLISVILLGI-- 522
            :|..|...|.|..|||:.:....:.|.|..:..|:::.|.|..|.:.|.|..:..||..|.||  
Mouse    45 LSPALLGIMWTFLSCGLLLVLFFLAFTIRCRKNRIVKMSSPNLNVVTLLGSCLTYISAYLFGIQD 109

  Fly   523 --DGRFVSPEEYPKICQARAWLLSTGFTLAYGAMFSKVWRVHRFTTKAKTDPKKKVEPWKLYTMV 585
              :|..|.     .:.|.|..||..|.:|.:|.:..|.||:::..|:...|.:..::..:|..:|
Mouse   110 ALEGSSVE-----ALIQTRLSLLCIGTSLVFGPILGKSWRLYKVFTQRVPDKRVIIKDLQLLGLV 169

  Fly   586 SGLLSIDLVILLSWQIFDPLQRYLETFPLEDPVSTTDDIKIRPELEHCESQRNSMWLGLVYGFKG 650
            :.|:..|:::|::|.:.||:| .|:...:...|:..|..........|.|:.:.:|:.||.|.||
Mouse   170 AALVVADVILLVTWVLTDPIQ-CLQMLGVSMKVTGRDVSCSLTNTHFCASRYSDVWIALVLGCKG 233

  Fly   651 LILVFGLFLAYETRSIKVKQINDSRYVGMSIYNVVVLCLITAPVGMVIA----SQQDASFA---- 707
            |:|::|.:||..|..:....:|.|    ::|...|.|.|:||.:..|:.    |..:..|.    
Mouse   234 LLLLYGAYLAGLTNHVSSPPVNQS----LTIMVGVNLLLLTAGLLFVVTRYLHSWPNLVFGLTSG 294

  Fly   708 --FVALAVIFCCFLSMLLIFVPKV---------IEVIRH-------PKDKAESKYNPDSAISKED 754
              ||....:.||      :|:|::         .:.:||       |......:::.|.:....|
Mouse   295 GIFVCTTTVNCC------VFIPQLKQWKAFEGENQTMRHMAKYFSTPSKSFHGQFDEDPSCHLRD 353

  Fly   755 EER-YQKLVTEN----EELQRLITQKEEKIRVLRQ----------RLVERGDAKGTELNGATGVA 804
            |:. .::|:||.    |.||..::..:||:..|..          .:.:...|:|..|   .|.:
Mouse   354 EKSCMERLLTEKNAVIESLQEQVSNAKEKLVKLMSAECTYDSPEWAVPDAASARGLAL---PGPS 415

  Fly   805 SAAVATTSQPASLINSSAHATPAA 828
            .....:.::..:....|.| .|||
Mouse   416 ECPAVSENESGAAARDSLH-VPAA 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABA-B-R1NP_523569.3 PBP1_GABAb_receptor 34..443 CDD:380589
7tmC_GABA-B-R1 463..734 CDD:320418 76/293 (26%)
TM helix 1 463..488 CDD:320418 7/24 (29%)
TM helix 2 500..521 CDD:320418 7/20 (35%)
TM helix 3 537..561 CDD:320418 9/23 (39%)
TM helix 4 581..601 CDD:320418 6/19 (32%)
TM helix 5 638..664 CDD:320418 11/25 (44%)
TM helix 6 673..696 CDD:320418 7/22 (32%)
TM helix 7 703..728 CDD:320418 6/30 (20%)
Gpr156NP_700443.2 7tmC_GPR156 48..317 CDD:320419 76/284 (27%)
TM helix 1 48..73 CDD:320419 7/24 (29%)
TM helix 2 85..106 CDD:320419 7/20 (35%)
TM helix 3 121..145 CDD:320419 9/23 (39%)
TM helix 4 165..185 CDD:320419 6/19 (32%)
TM helix 5 221..247 CDD:320419 11/25 (44%)
TM helix 6 256..279 CDD:320419 8/26 (31%)
TM helix 7 286..311 CDD:320419 6/30 (20%)
rad18 347..>538 CDD:273165 20/96 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 441..497
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..666
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..715
Blue background indicates that the domain is not in the aligned region.

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