DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rnmt and ABD1

DIOPT Version :9

Sequence 1:NP_523568.2 Gene:Rnmt / 34877 FlyBaseID:FBgn0286027 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_009795.3 Gene:ABD1 / 852538 SGDID:S000000440 Length:436 Species:Saccharomyces cerevisiae


Alignment Length:472 Identity:132/472 - (27%)
Similarity:190/472 - (40%) Gaps:125/472 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QNAADEQFARAHKAVSLSDDEESEGQAETTSAPNQEPHVSKSPREYYDEPGGKGNGS-------- 63
            |...|.|:.      |::.||.|.              |||...:......|.||||        
Yeast    13 QEDYDRQYG------SITGDESST--------------VSKKDSKVTANAPGDGNGSLPVLQSSS 57

  Fly    64 --GADDQDEPETEAASG-------------------------------------AAN-----THV 84
              .:...|.| .||.||                                     .||     ..:
Yeast    58 ILTSKVSDLP-IEAESGFKIQKRRHERYDQEERLRKQRAQKLREEQLKRHEIEMTANRSINVDQI 121

  Fly    85 VAHHYNELK-EAGRKDRQKSKIFFMRNFNNWIKSQLINEYMSQIKQNKRMGDALRVLDMCCGKGG 148
            |..||||.. .|.|..|..|.|..:|||||.||..||::|       .:.||.  ||::.|||||
Yeast   122 VREHYNERTIIANRAKRNLSPIIKLRNFNNAIKYMLIDKY-------TKPGDV--VLELGCGKGG 177

  Fly   149 DLLKWEKAAISHLICTDIAEVSVEQCQRRYQDILQRSEKSKFANKFTAEFFACDSTLVRLRERYK 213
            ||.|:..|.||..|..||:..|:::..:||:.:.....:...   .|.:.|. :|..|.: |.:.
Yeast   178 DLRKYGAAGISQFIGIDISNASIQEAHKRYRSMRNLDYQVVL---ITGDCFG-ESLGVAV-EPFP 237

  Fly   214 DPSLQLNLVSCQFAFHYCFESMAQADCMMRNAAECLKPGGFFIATMPDAYEIIRRLRAAGPDARR 278
            |.....::||.||..||.||:..:|...:.|.|:.||.||.|..|:||:..|..:|.....:..:
Yeast   238 DCRFPCDIVSTQFCLHYAFETEEKARRALLNVAKSLKIGGHFFGTIPDSEFIRYKLNKFPKEVEK 302

  Fly   279 --FGNDVYSIEF--------DCE-TDPLPLFGAKYQFHLEGVVD-CPEFLVHFPTLVKLGRKYGL 331
              :||.:|.:.|        |.| |.|   :|..|.:.||..:| .||::|.|.||..|..:|||
Yeast   303 PSWGNSIYKVTFENNSYQKNDYEFTSP---YGQMYTYWLEDAIDNVPEYVVPFETLRSLADEYGL 364

  Fly   332 QLLKRSTFADYYKENLHHGRHLLQRMSGLESVQPQRCENDEEFAHVSNFQGAQRSRSVGTLSKSE 396
            :|:.:..|..::.:.:         ...:|...|:..|            |.|||.....:...|
Yeast   365 ELVSQMPFNKFFVQEI---------PKWIERFSPKMRE------------GLQRSDGRYGVEGDE 408

  Fly   397 WEAAT-LYLVCAFKKCK 412
            .|||: .|.:.||:|.|
Yeast   409 KEAASYFYTMFAFRKVK 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnmtNP_523568.2 Pox_MCEL 72..411 CDD:281307 113/394 (29%)
ABD1NP_009795.3 Pox_MCEL 109..424 CDD:281307 109/352 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344744
Domainoid 1 1.000 125 1.000 Domainoid score I1195
eggNOG 1 0.900 - - E1_KOG1975
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 127 1.000 Inparanoid score I1271
Isobase 1 0.950 - 0 Normalized mean entropy S2396
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004895
OrthoInspector 1 1.000 - - oto99217
orthoMCL 1 0.900 - - OOG6_102244
Panther 1 1.100 - - LDO PTHR12189
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R689
SonicParanoid 1 1.000 - - X3451
TreeFam 1 0.960 - -
1413.730

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