DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnmt and rnmt

DIOPT Version :9

Sequence 1:NP_523568.2 Gene:Rnmt / 34877 FlyBaseID:FBgn0286027 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001038465.1 Gene:rnmt / 562801 ZFINID:ZDB-GENE-041008-25 Length:400 Species:Danio rerio


Alignment Length:400 Identity:168/400 - (42%)
Similarity:245/400 - (61%) Gaps:37/400 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DEESEGQAETTSAPNQEPHVSKSPREYYDEPGGKGNGSGADDQDEPETE-AASGAANTHVVAHHY 89
            |::|.|.:..:|..:.....|...|        :.:|...||...|..: ....:.::..||.||
Zfish    21 DKDSIGSSFDSSQTSTSSSSSSVKR--------RRDGDEEDDDHSPSKKLVTEDSLHSQKVATHY 77

  Fly    90 NELKEAGRKDRQKSKIFFMRNFNNWIKSQLINEYMSQIKQNKRMGDALRVLDMCCGKGGDLLKWE 154
            |::||.|..:|.||:|.:|||||||:||.||.|.:.:::|.:|   .:.|||:.||||||||||:
Zfish    78 NKIKECGLAERNKSRIVYMRNFNNWLKSVLIAEILDKVRQKRR---EVTVLDLGCGKGGDLLKWK 139

  Fly   155 KAAISHLICTDIAEVSVEQCQRRYQDILQRSEKSKFANKFTAEFFACDSTLVRLRERYKDPSLQL 219
            |..|..|:|.|||.||:||||:||.|:.:|...:.  ..|:|||...|.:...|.|:.:||.||.
Zfish   140 KGRIDKLVCADIAAVSIEQCQQRYNDVRRRGHPND--RTFSAEFITADCSRELLSEKLQDPELQF 202

  Fly   220 NLVSCQFAFHYCFESMAQADCMMRNAAECLKPGGFFIATMPDAYEIIRRLRAAGPDARRFGNDVY 284
            ::.||||.:||.|||.:|||.|:|||.|.|:||||||.|.|||||:::||..:  |:..|||:|:
Zfish   203 DVCSCQFVYHYSFESESQADTMLRNACERLRPGGFFIGTTPDAYELVKRLEES--DSNSFGNEVF 265

  Fly   285 SIEFDCETDPLPLFGAKYQFHLEGVVDCPEFLVHFPTLVKLGRKYGLQLLKRSTFADYYKENLHH 349
            |:.|. :....||||.:|.|.|||||:.|||||:||..|::.:||.::|:.:.||.::::|.:..
Zfish   266 SVTFQ-KKGEYPLFGCQYDFSLEGVVNVPEFLVYFPLFVEMAKKYNMRLVYKKTFKEFFEEKVKD 329

  Fly   350 GRH--LLQRMSGLESVQPQRCENDEEFAHVSN-----FQGAQRS-------RSVGTLSKSEWEAA 400
            |::  |:|.|..||...|      :|...:|:     :..|:|.       |.:||||||||||.
Zfish   330 GKNKDLMQWMQALEQYPP------DERGQLSSSGPGEYDHAKRKAADPAVRRPLGTLSKSEWEAT 388

  Fly   401 TLYLVCAFKK 410
            ::|||..|:|
Zfish   389 SIYLVYVFEK 398

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
RnmtNP_523568.2 Pox_MCEL 72..411 CDD:281307 157/353 (44%)
rnmtNP_001038465.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..68 10/54 (19%)
Pox_MCEL 69..398 CDD:281307 157/342 (46%)
SmtA 85..>256 CDD:223574 91/177 (51%)