DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnmt and rnmt

DIOPT Version :9

Sequence 1:NP_523568.2 Gene:Rnmt / 34877 FlyBaseID:FBgn0286027 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001017053.1 Gene:rnmt / 549807 XenbaseID:XB-GENE-944369 Length:405 Species:Xenopus tropicalis


Alignment Length:412 Identity:174/412 - (42%)
Similarity:244/412 - (59%) Gaps:42/412 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DDEESEGQAET--TSAPNQ---EPHVS----------KSPREYYDEPGGKGNGSGADDQDEPETE 74
            :|..|:...||  |..|.|   |.|.|          .||.:....|..:..|........|..|
 Frog     8 EDNVSQTNTETDVTDGPFQYVKEEHSSHKFTASGQNLDSPPKNKKSPLKRKAGEPESPSKRPRLE 72

  Fly    75 AASGAANTHVVAHHYNELKEAGRKDRQKSKIFFMRNFNNWIKSQLINEYMSQIKQNKRMGDALRV 139
            ...|:    :|..|||||.|.|.:.|.:|:||.:||||||:||.||.|::.:::|..|   .:.|
 Frog    73 EGHGS----LVVTHYNELPETGLETRSQSRIFHLRNFNNWMKSALIGEFVEKVRQRTR---NIAV 130

  Fly   140 LDMCCGKGGDLLKWEKAAISHLICTDIAEVSVEQCQRRYQDILQRSEKSKFANKFTAEFFACDST 204
            ||:.||||||||||.|..||.|:|||||:|||:||:.||:|:.::|...:.   |.|||...|||
 Frog   131 LDLGCGKGGDLLKWRKGGISKLVCTDIADVSVKQCEERYKDLKRKSRNERV---FEAEFLTADST 192

  Fly   205 LVRLRERYKDPSLQLNLVSCQFAFHYCFESMAQADCMMRNAAECLKPGGFFIATMPDAYEIIRRL 269
            ...|.|:|.||.::.::.||||.:||.||:..|||.|:|||.|.|.||||||.|.||.:|:::||
 Frog   193 KELLSEKYNDPEIKFDICSCQFVYHYSFETYEQADMMLRNACERLCPGGFFIGTTPDGFELVKRL 257

  Fly   270 RAAGPDARRFGNDVYSIEFDCETDPLPLFGAKYQFHLEGVVDCPEFLVHFPTLVKLGRKYGLQLL 334
            .|:  |...||||||:::|: :....||||.||.|.||.||:.|||||:||.||::.:||.::|:
 Frog   258 EAS--DTNSFGNDVYTVKFE-KKGKYPLFGCKYDFSLEEVVNVPEFLVYFPVLVEMAKKYQMKLI 319

  Fly   335 KRSTFADYYKENLHHG--RHLLQRMSGLESVQPQRCE--------NDEEFAHVSNF-QGAQRSRS 388
            .:.||.::::|.:.:.  :.||:||..||   |....        ..|::.|.... :..|....
 Frog   320 YKKTFREFFEEKVKNDEQKMLLKRMKALE---PYPAAPNFKLVSGRTEDYEHAQKLVENGQVKLP 381

  Fly   389 VGTLSKSEWEAATLYLVCAFKK 410
            :||||||||||.::||:.||:|
 Frog   382 LGTLSKSEWEATSIYLLFAFEK 403

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
RnmtNP_523568.2 Pox_MCEL 72..411 CDD:281307 159/350 (45%)
rnmtNP_001017053.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78 17/73 (23%)
Pox_MCEL 70..404 CDD:281307 159/350 (45%)