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Protein Alignment Rnmt and Rnmt

DIOPT Version :9

Sequence 1:	NP_523568.2	Gene:	Rnmt / 34877	FlyBaseID:	FBgn0286027	Length:	427	Species:	Drosophila melanogaster
Sequence 2:	NP_001008300.1	Gene:	Rnmt / 291534	RGDID:	1309242	Length:	461	Species:	Rattus norvegicus

Alignment Length:	466	Identity:	179/466 - (38%)
Similarity:	260/466 - (55%)	Gaps:	86/466 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 KAVSLSDDEESEGQAETTSAPNQEPHVSKSPREYYDEP--------------------------- 56
            ||...|:.|.|.|..||.:|..|  .:|:..|:..|:|
  Rat     6 KASVDSETESSPGVNETAAASGQ--RLSEKTRQQADQPKTQDDLVEQNSSYVQDSPSKKRKLDVE 68

  Fly    57 -----------GGKG------NGSGADDQDEP----------------ETEAAS----GAANTHV 84
                       ||..      .|.|::|:..|                ||:...    ...::..
  Rat    69 IILDEKHSEDDGGASKRSKLERGGGSEDEPSPGGLTERKRKLQPQDALETQTRKFQKLEEGHSSA 133

  Fly    85 VAHHYNELKEAGRKDRQKSKIFFMRNFNNWIKSQLINEYMSQIKQNKRMGDALRVLDMCCGKGGD 149
            ||.|||||:|.|...|.:|:||::|||||||||.||.|.:.:::|.|...  :.|||:.||||||
  Rat   134 VAAHYNELQEVGLVKRSQSRIFYLRNFNNWIKSILIGEILEKVRQRKNRD--ITVLDLGCGKGGD 196

  Fly   150 LLKWEKAAISHLICTDIAEVSVEQCQRRYQDILQRSEKSKFANKFTAEFFACDSTLVRLRERYKD 214
            ||||.|..||.|:|.|||::|::|||:||:|:..|.:....   |:|||...|.:...|.|::.|
  Rat   197 LLKWRKGRISRLVCADIADISMKQCQQRYEDMKCRRDNEYI---FSAEFITADCSKELLVEKFHD 258

  Fly   215 PSLQLNLVSCQFAFHYCFESMAQADCMMRNAAECLKPGGFFIATMPDAYEIIRRLRAAGPDARRF 279
            |.:..::.|||||.||.|||:.|||.|:|||...|.|||:||.|.|:::|:||||.|:  :...|
  Rat   259 PEMYFDICSCQFACHYSFESLEQADMMLRNACGRLNPGGYFIGTTPNSFELIRRLEAS--ETESF 321

  Fly   280 GNDVYSIEFDCETDPLPLFGAKYQFHLEGVVDCPEFLVHFPTLVKLGRKYGLQLLKRSTFADYYK 344
            ||::|:::|. :....||||.||.|:||||||.|||||:||.|.::.:||.::|:.:.||.::|:
  Rat   322 GNEIYTVKFQ-KKGNYPLFGCKYDFNLEGVVDVPEFLVYFPLLTEMAKKYNMKLIYKKTFLEFYE 385

  Fly   345 ENL--HHGRHLLQRMSGLESVQPQRCENDE-------EFAHVSNF-QGAQRSRSVGTLSKSEWEA 399
            |.:  :..:.||:||..|||....  ||.:       ::||.:.: :.:|....:||||||||||
  Rat   386 EKIKNNENKMLLKRMQALESYPAN--ENSKLASEKAGDYAHAAEYMKNSQVRLPLGTLSKSEWEA 448

  Fly   400 ATLYLVCAFKK 410
            .::|||.||:|
  Rat   449 TSIYLVFAFEK 459

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.