DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rnmt and pcm1

DIOPT Version :9

Sequence 1:NP_523568.2 Gene:Rnmt / 34877 FlyBaseID:FBgn0286027 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001342758.1 Gene:pcm1 / 2539280 PomBaseID:SPCC330.10 Length:360 Species:Schizosaccharomyces pombe


Alignment Length:398 Identity:123/398 - (30%)
Similarity:182/398 - (45%) Gaps:71/398 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ESEGQAETTSAPNQEPHVSKSPREYY---DEPGGKG------NGSGADDQDEPETEAASGAANTH 83
            |:...|..|:..|:........|:|:   |..|.:|      ||:..|                 
pombe    16 ENRRYARPTAQMNRVIEQQPRRRDYFQNNDNSGRRGYNRHENNGNAQD----------------- 63

  Fly    84 VVAHHYNELKEAGRKDRQKSKIFFMRNFNNWIKSQLINEYMSQIKQNKRMGDALRVLDMCCGKGG 148
            ||..|||...:.|.|.||.|.|..::.|||||||.||.::.......     .:.||||.|||||
pombe    64 VVRSHYNARPDLGYKKRQFSPIIQLKRFNNWIKSVLIQKFAPHASDY-----PILVLDMGCGKGG 123

  Fly   149 DLLKWEKAAISHLICTDIAEVSVEQCQRRYQDILQRSEKSKFANKFTAEFFACDSTLVRLRERYK 213
            ||:||:||.|...|..|||||||.|.::||:::         ...|.|.|:|.|.....:.|...
pombe   124 DLIKWDKAGIDGYIGIDIAEVSVNQAKKRYREM---------HASFDALFYAGDCFSSSINELLP 179

  Fly   214 DPSLQLNLVSCQFAFHYCFESMAQADCMMRNAAECLKPGGFFIATMPDAYEIIRRLRAAGPDARR 278
            ....:.::||.||..||.|||..:...::.|.::||..||..|.|:|::..|::.::...|..:.
pombe   180 PDQRKFDVVSLQFCMHYAFESEEKVRVLLGNVSKCLPRGGVMIGTIPNSDVIVKHIKMLKPGEKE 244

  Fly   279 FGNDVYSIEFDCETDP---LPLFGAKYQFHLE-GVVDCPEFLVHFPTLVKLGRKYGLQLLKRSTF 339
            :|||:|.:.|. |:.|   .|.:|.:|.|:|| .|.|.||::|.|.....:...|.|:|:....|
pombe   245 WGNDIYKVRFP-ESPPRSFRPPYGIQYYFYLEDAVTDVPEYVVPFEAFRAVAEGYNLELIWVKPF 308

  Fly   340 ADYYKENLHHGRH--LLQRMSGLESVQPQRCENDEEFAHVSNFQGAQRSRSVGTLSKSEWEAATL 402
            .|...|..:...:  |:.||..:::                     :..|.:|...|   |||..
pombe   309 LDILNEEKNSETYGPLMDRMKVVDN---------------------EGHRGIGGQEK---EAAGF 349

  Fly   403 YLVCAFKK 410
            ||..||:|
pombe   350 YLAFAFEK 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RnmtNP_523568.2 Pox_MCEL 72..411 CDD:281307 111/345 (32%)
pcm1NP_001342758.1 Pox_MCEL 52..358 CDD:281307 114/362 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 166 1.000 Domainoid score I934
eggNOG 1 0.900 - - E1_KOG1975
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 166 1.000 Inparanoid score I1212
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004895
OrthoInspector 1 1.000 - - oto100768
orthoMCL 1 0.900 - - OOG6_102244
Panther 1 1.100 - - LDO PTHR12189
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R689
SonicParanoid 1 1.000 - - X3451
TreeFam 1 0.960 - -
1211.850

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