DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NC2beta and NF-YB10

DIOPT Version :9

Sequence 1:NP_609736.1 Gene:NC2beta / 34875 FlyBaseID:FBgn0028926 Length:183 Species:Drosophila melanogaster
Sequence 2:NP_001327562.1 Gene:NF-YB10 / 824502 AraportID:AT3G53340 Length:176 Species:Arabidopsis thaliana


Alignment Length:127 Identity:36/127 - (28%)
Similarity:68/127 - (53%) Gaps:15/127 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SAEDDELTLPRASINKIIKELVP-TVRVANESRELILNCCSEFIHLISSEANEVCNMRNKKTINA 75
            :..:.:..||.|:|::|:|..:| ..::|.:::|.:..|.||||..::|||::.|....:||||.
plant    26 NVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTING 90

  Fly    76 EHVLEALERLGFHDYKQEAEAVLHDCKEV-------------AAKRRRQSTRLENLG-IPEE 123
            :.:|.|:..|||.||....:..|...:|:             :|||..|.:::.... :|::
plant    91 DDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQ 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NC2betaNP_609736.1 H4 15..135 CDD:304892 36/124 (29%)
NF-YB10NP_001327562.1 CBFD_NFYB_HMF 32..97 CDD:395650 23/64 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.