DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)35Be and Ankrd24

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_006514154.1 Gene:Ankrd24 / 70615 MGIID:1890394 Length:1088 Species:Mus musculus


Alignment Length:213 Identity:54/213 - (25%)
Similarity:77/213 - (36%) Gaps:52/213 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ERMILWAVNENRISEVREIL--------KLDAD-------------------------TVNAKDN 80
            ::.:|.||..|.::.|..::        |||.:                         .|.:.|.
Mouse    67 DQRLLQAVENNDVARVASLIAHKGLVPTKLDPEGKSAFHLAAMRGAAGCLEVMLAQGADVMSTDG 131

  Fly    81 DGYTPLHRAAYNNFVDMAKLLLQYHANPNARTELGWTPLHSACKWNNADCAHLLLQFGADVNAES 145
            .||..||.||.....:..|.||:.....:.....|||.||.|.......|:.||..|.|.:|...
Mouse   132 AGYNALHLAAKYGHPECLKQLLEASCVVDIEDSSGWTALHHAAAGGCLSCSKLLCSFKAHMNPRD 196

  Fly   146 DGKQTPLHITATVSNCRNTATVLLL-------DRYIQPRK------ENNSEELASVIARRTGMSF 197
            ....|||.|.|.:  |......|||       |:.:|.|.      |..|.|...|:. :.|...
Mouse   197 RSGATPLIIAAQM--CHTDLCRLLLQQGAATNDQDLQGRTALMLACEGGSPETVEVLL-QGGAQL 258

  Fly   198 PIFES-GEEA--YDCETG 212
            .|.:: |::|  |...||
Mouse   259 SITDALGQDATHYGALTG 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 9/59 (15%)
ANK 54..169 CDD:238125 36/147 (24%)
Ank_5 67..120 CDD:290568 17/85 (20%)
ANK repeat 81..112 CDD:293786 9/30 (30%)
Ank_5 100..154 CDD:290568 17/53 (32%)
ANK repeat 114..144 CDD:293786 12/29 (41%)
ANK repeat 147..180 CDD:293786 12/45 (27%)
Ankrd24XP_006514154.1 ANK repeat 70..97 CDD:293786 6/26 (23%)
PHA02875 73..>260 CDD:165206 47/189 (25%)
ANK repeat 99..130 CDD:293786 1/30 (3%)
ANK repeat 133..163 CDD:293786 9/29 (31%)
Ank_2 137..229 CDD:372319 29/93 (31%)
ANK repeat 165..196 CDD:293786 12/30 (40%)
ANK repeat 198..229 CDD:293786 10/32 (31%)
PTZ00322 207..>328 CDD:140343 19/73 (26%)
ANK repeat 231..262 CDD:293786 8/31 (26%)
SMC_prok_B <342..1042 CDD:274008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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