DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)35Be and asb5b

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001017753.1 Gene:asb5b / 550449 ZFINID:ZDB-GENE-050417-271 Length:328 Species:Danio rerio


Alignment Length:196 Identity:50/196 - (25%)
Similarity:75/196 - (38%) Gaps:53/196 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 AVNENRISEVREILKLDADTVNAKDNDGYTPLHRAAYNNFVDMAKLLLQYHANPNARTELGWTPL 119
            |..:.|:..::.:|. ...:.|....|..||||.|...:.|..|:.|::..||.||.|..|.|||
Zfish    76 AACQGRLLALKTLLS-QGYSANIVTIDHVTPLHEACLGDHVACARALIEAGANVNATTIDGVTPL 139

  Fly   120 HSACKWNNADCAHLLLQ--------------------------------FGADVNAESDGKQTPL 152
            .:||...:..||.:||:                                :||||:.:.....|||
Zfish   140 FNACSAGSVTCAEVLLEHGAKPQGEVCQPSPIHEASSKGRAACIDSLISWGADVDFDIPHLGTPL 204

  Fly   153 HITATVSNCRNTATVLL-----------LDRYIQPRKENNSEEL--------ASVIARRTGMSFP 198
            :| |..|.....|..||           ||..:....:.:|.|:        ||:.||...:..|
Zfish   205 YI-ACASQQLQCAQKLLDGGANVQKGRFLDTPLHAAAQKDSPEIIKVLLEFGASINARNVELQKP 268

  Fly   199 I 199
            :
Zfish   269 V 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 4/23 (17%)
ANK 54..169 CDD:238125 39/145 (27%)
Ank_5 67..120 CDD:290568 19/52 (37%)
ANK repeat 81..112 CDD:293786 13/30 (43%)
Ank_5 100..154 CDD:290568 23/85 (27%)
ANK repeat 114..144 CDD:293786 14/61 (23%)
ANK repeat 147..180 CDD:293786 11/43 (26%)
asb5bNP_001017753.1 ANK 70..187 CDD:238125 28/111 (25%)
ANK repeat 70..99 CDD:293786 4/23 (17%)
Ank_2 73..161 CDD:289560 28/85 (33%)
ANK repeat 101..132 CDD:293786 13/30 (43%)
ANK repeat 134..162 CDD:293786 10/27 (37%)
ANK 169..284 CDD:238125 22/102 (22%)
ANK repeat 169..197 CDD:293786 4/27 (15%)
Ank_2 171..262 CDD:289560 20/91 (22%)
ANK repeat 199..229 CDD:293786 9/30 (30%)
ANK repeat 231..262 CDD:293786 7/30 (23%)
ANK repeat 264..302 CDD:293786 1/6 (17%)
SOCS_ASB5 287..328 CDD:239694
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1546307at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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