DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)35Be and Asb12

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001032444.1 Gene:Asb12 / 503446 RGDID:1561142 Length:308 Species:Rattus norvegicus


Alignment Length:174 Identity:51/174 - (29%)
Similarity:73/174 - (41%) Gaps:48/174 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ISEVREILKL--------DADTVNAK-------DNDGYT---PLHRAAYNNFVDMAKLLLQYHAN 107
            :.::.:|..|        ||||...:       |||..|   .||:..|..|:            
  Rat     3 LMDIAKIFSLLQPEKEEEDADTGEKQALNQAVYDNDSCTLDHLLHQERYKRFI------------ 55

  Fly   108 PNARTELGW----TPLHSACKWNNADCAHLLLQFGADVNAESDGKQTPLHITATVSNCRNTATVL 168
             |:|:  ||    |||..|..:.:.||..:||:.||||::.....|||| .|| ||:.......:
  Rat    56 -NSRS--GWGIPGTPLRLAASYGHLDCVKVLLEHGADVDSLDVKAQTPL-FTA-VSHGHLECVRI 115

  Fly   169 LLDRYIQPRKE--NNSEELASVIARRTGMSFPIFES----GEEA 206
            ||:....|...  ||...:  :.|.|.| :|.|.:.    |.||
  Rat   116 LLEAGACPSGSIYNNCSPV--LTASRDG-AFAILQELLGHGAEA 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 6/32 (19%)
ANK 54..169 CDD:238125 38/129 (29%)
Ank_5 67..120 CDD:290568 20/74 (27%)
ANK repeat 81..112 CDD:293786 7/33 (21%)
Ank_5 100..154 CDD:290568 20/57 (35%)
ANK repeat 114..144 CDD:293786 14/33 (42%)
ANK repeat 147..180 CDD:293786 11/34 (32%)
Asb12NP_001032444.1 ANK repeat 66..94 CDD:293786 12/27 (44%)
Ank_2 68..159 CDD:403870 31/94 (33%)
ANK repeat 96..160 CDD:293786 21/66 (32%)
ANK repeat 173..199 CDD:293786
Ank 175..199 CDD:394980
SOCS_box 268..306 CDD:400074
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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