DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)35Be and CG8003

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:NP_001261683.1 Gene:CG8003 / 39210 FlyBaseID:FBgn0036096 Length:407 Species:Drosophila melanogaster


Alignment Length:143 Identity:43/143 - (30%)
Similarity:57/143 - (39%) Gaps:32/143 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 EVREILKLD------ADTVNAKDNDGYTPLHRAAYN-NFVDMAKLLLQYHANPNARTELGWTPLH 120
            |.::|::||      .|.:...|..|:..|.....| ||||                :.|.:.|.
  Fly     4 ESKKIVQLDDVQRQLLDHLAKNDTSGFKQLLSGVRNVNFVD----------------DTGMSCLA 52

  Fly   121 SACKWNNADCAHLLLQFGADVNAESDGKQ-TPLHITATVSN---CRNTATVLLLDRYIQPRKENN 181
            .|....|.:...|||..|||:|....|.. ||||..|...|   ||     ||||..|:|...|:
  Fly    53 HASFKGNREAVQLLLDMGADINLNQHGADYTPLHFAALSGNTHVCR-----LLLDAGIKPGSINS 112

  Fly   182 SEELASVIARRTG 194
            ....|:.:|...|
  Fly   113 VNRTAAQMAAFVG 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 5/21 (24%)
ANK 54..169 CDD:238125 33/116 (28%)
Ank_5 67..120 CDD:290568 13/59 (22%)
ANK repeat 81..112 CDD:293786 7/31 (23%)
Ank_5 100..154 CDD:290568 15/54 (28%)
ANK repeat 114..144 CDD:293786 11/29 (38%)
ANK repeat 147..180 CDD:293786 15/36 (42%)
CG8003NP_001261683.1 ANK 21..133 CDD:238125 38/126 (30%)
Ank_2 21..107 CDD:289560 33/106 (31%)
ANK repeat 46..76 CDD:293786 11/29 (38%)
ANK repeat 78..105 CDD:293786 13/31 (42%)
zf-MYND 333..370 CDD:280009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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