DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)35Be and Asb5

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_017455679.1 Gene:Asb5 / 361187 RGDID:1565973 Length:329 Species:Rattus norvegicus


Alignment Length:111 Identity:43/111 - (38%)
Similarity:58/111 - (52%) Gaps:4/111 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 AVNENRISEVREILKLDADTVNAKDNDGYTPLHRAAYNNFVDMAKLLLQYHANPNARTELGWTPL 119
            |.::.|:..:|.:|. ....|||...|..||||.|...:.|..|:.||:..||.||.|..|.|||
  Rat    77 AASQGRLLALRTLLS-QGYNVNAVTIDHVTPLHEACLGDHVACARTLLEAGANANAITIDGVTPL 140

  Fly   120 HSACKWNNADCAHLLLQFGADVNAESDGKQTPLHITATVSN--CRN 163
            .:||...:|.||.|||::||....|| ...:|.|..|:..:  |.|
  Rat   141 FNACSQGSASCAELLLEYGAKAQLES-CFPSPTHEAASKGHHECLN 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 7/23 (30%)
ANK 54..169 CDD:238125 43/111 (39%)
Ank_5 67..120 CDD:290568 22/52 (42%)
ANK repeat 81..112 CDD:293786 14/30 (47%)
Ank_5 100..154 CDD:290568 24/53 (45%)
ANK repeat 114..144 CDD:293786 14/29 (48%)
ANK repeat 147..180 CDD:293786 5/19 (26%)
Asb5XP_017455679.1 ANK repeat 71..100 CDD:293786 7/23 (30%)
PHA02876 <72..>288 CDD:165207 43/111 (39%)
ANK repeat 102..133 CDD:293786 14/30 (47%)
ANK repeat 135..160 CDD:293786 12/24 (50%)
ANK repeat 170..198 CDD:293786 5/16 (31%)
ANK repeat 200..230 CDD:293786
ANK repeat 232..263 CDD:293786
SOCS_ASB5 288..329 CDD:239694
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1546307at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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