DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)35Be and Rnasel

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_038946794.1 Gene:Rnasel / 359726 RGDID:727933 Length:743 Species:Rattus norvegicus


Alignment Length:235 Identity:55/235 - (23%)
Similarity:90/235 - (38%) Gaps:74/235 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 MILWAVNENRISEVREILKLDADTVNAKDNDGYTPLHRAAYNNFVDMAKLLLQYHANPNARTELG 115
            :::.|||:.....|:::|:..||....:::.|:||||.|..:..||:..|||:|.|:|:.|.:.|
  Rat    28 LLIEAVNKGDADRVQQLLEQGADANVCEESGGWTPLHNAVQSGRVDIVNLLLRYGADPHRRKKNG 92

  Fly   116 WTP---------------------------LH------SACKWNNADCAHLLLQFGADVNAESDG 147
            .||                           :|      .|.::.|.:....|...|||||...:.
  Rat    93 ATPFIIAGICGDVSLLQIFLSRGANINERDMHGFTAFMEAAEYGNVEALKFLFAEGADVNLRRET 157

  Fly   148 KQTPLHI-----TATVSNCRN---TATVLLLD------------------RYIQPRK----ENNS 182
            .:....:     ||.:|...|   ....:|||                  |.:..|.    |.:.
  Rat   158 TEDRRRLKQGGATALMSAAENGHPEVVRILLDEMKAEADARDNMGRNALIRSLLNRDCENVEIHV 222

  Fly   183 EELASVI--------ARRTGMSFPIFESGEEAYDCETGLI 214
            ||:.||:        .|..|...|:..:.|..:   |||:
  Rat   223 EEITSVLIQYGADINVRGEGEKTPLISAVERKH---TGLV 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 7/26 (27%)
ANK 54..169 CDD:238125 38/155 (25%)
Ank_5 67..120 CDD:290568 21/79 (27%)
ANK repeat 81..112 CDD:293786 14/30 (47%)
Ank_5 100..154 CDD:290568 19/86 (22%)
ANK repeat 114..144 CDD:293786 12/62 (19%)
ANK repeat 147..180 CDD:293786 9/62 (15%)
RnaselXP_038946794.1 PHA02875 29..>188 CDD:165206 38/158 (24%)
ANK repeat 29..55 CDD:293786 7/25 (28%)
ANK repeat 59..89 CDD:293786 14/29 (48%)
ANK repeat 91..122 CDD:293786 3/30 (10%)
ANK repeat 124..153 CDD:293786 8/28 (29%)
ANK repeat 167..199 CDD:293786 7/31 (23%)
Ank_4 170..216 CDD:372654 9/45 (20%)
ANK repeat 201..239 CDD:293786 7/37 (19%)
Ank_2 224..302 CDD:403870 10/39 (26%)
ANK repeat 242..274 CDD:293786 6/21 (29%)
PTZ00322 259..>369 CDD:140343 0/1 (0%)
ANK repeat 276..301 CDD:293786
PKc_like 379..590 CDD:419665
RNase_RNase-L 599..715 CDD:199218
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.