DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)35Be and Anks1b

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_017450317.2 Gene:Anks1b / 314721 RGDID:1565556 Length:1281 Species:Rattus norvegicus


Alignment Length:122 Identity:38/122 - (31%)
Similarity:59/122 - (48%) Gaps:5/122 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VNAKDNDGYTPLHRAAYNNFVDMAKLLLQYHANPNARTELGWTPLHSACKWNNADCAHLLLQFG- 138
            ||..|:.|||.||.||.|...|:...|||:.|:.|.....|:.|:|.|....:.:...:|:..| 
  Rat    52 VNCTDSSGYTALHHAALNGHKDIVLKLLQFEASTNVADNKGYFPIHLAAWKGDVEIVKILIHHGP 116

  Fly   139 --ADVNAESDGKQTPLHITATVSNCRNTATVL--LLDRYIQPRKENNSEELASVIAR 191
              :.||.:::..:|.||..|...:....|.:|  |.|..|:..|.....:||::..|
  Rat   117 SHSRVNEQNNENETALHCAAQYGHSEVVAVLLEELTDPTIRNSKLETPLDLAALYGR 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 2/3 (67%)
ANK 54..169 CDD:238125 31/98 (32%)
Ank_5 67..120 CDD:290568 19/44 (43%)
ANK repeat 81..112 CDD:293786 14/30 (47%)
Ank_5 100..154 CDD:290568 15/56 (27%)
ANK repeat 114..144 CDD:293786 8/32 (25%)
ANK repeat 147..180 CDD:293786 10/34 (29%)
Anks1bXP_017450317.2 PTB_Anks 1067..1216 CDD:269972
PHA02874 7..386 CDD:165205 38/122 (31%)
ANK repeat 7..56 CDD:293786 2/3 (67%)
ANK repeat 58..89 CDD:293786 14/30 (47%)
Ank_2 63..158 CDD:403870 28/94 (30%)
ANK repeat 91..125 CDD:293786 8/33 (24%)
ANK repeat 127..158 CDD:293786 9/30 (30%)
ANK repeat 160..191 CDD:293786 4/14 (29%)
Ank_2 165..256 CDD:403870 3/9 (33%)
ANK repeat 193..223 CDD:293786
ANK repeat 226..256 CDD:293786
SAM_AIDA1AB-like_repeat1 807..873 CDD:188898
SAM_AIDA1AB-like_repeat2 878..942 CDD:188899
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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