DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)35Be and Caskin1

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_006245957.1 Gene:Caskin1 / 140722 RGDID:620191 Length:1437 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786
ANK 54..169 CDD:238125
Ank_5 67..120 CDD:290568
ANK repeat 81..112 CDD:293786
Ank_5 100..154 CDD:290568
ANK repeat 114..144 CDD:293786
ANK repeat 147..180 CDD:293786
Caskin1XP_006245957.1 ANK 43..175 CDD:238125
ANK repeat 56..86 CDD:293786
Ank_2 60..152 CDD:289560
ANK repeat 88..119 CDD:293786
ANK 116..248 CDD:238125
ANK repeat 121..152 CDD:293786
Ank_2 126..225 CDD:289560
ANK repeat 154..193 CDD:293786
ANK repeat 195..225 CDD:293786
Ank_5 215..268 CDD:290568
ANK repeat 228..258 CDD:293786
ANK repeat 260..294 CDD:293786
SH3_Caskin1 291..352 CDD:212995
Caskin1-CID 380..428 CDD:293208
SAM 479..541 CDD:197735
SAM_caskin1,2_repeat1 480..545 CDD:188896
SAM_caskin1,2_repeat2 547..616 CDD:188897
SAM 558..613 CDD:197735
Caskin-Pro-rich 884..955 CDD:293512
Caskin-tail 1375..1437 CDD:293238
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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