DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)35Be and invs

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_002939636.1 Gene:invs / 100487895 XenbaseID:XB-GENE-1221137 Length:1004 Species:Xenopus tropicalis


Alignment Length:134 Identity:39/134 - (29%)
Similarity:62/134 - (46%) Gaps:14/134 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VNAKDNDGYTPLHRAAYNNFVDMAKLLLQYHANPNARTELGWTPLHSACKWNNADCAHLLLQFGA 139
            |:..|.||.:|||.||.....::.::|::.:.||:|:...|.|||..|.......|..:|::..|
 Frog   412 VHLVDKDGRSPLHWAALGGNANVCQILIENNINPDAQDYEGRTPLQCAAYGGYIGCMEVLMENKA 476

  Fly   140 DVNAESDGKQTPLHITATVSNCRN---TATVLLLDRYIQPRKENNSEELASVIARRTGMSFPIFE 201
            |.|.:....:|.||     .:|.|   .|..|||.....|.:..|:||      |.|.:.:.:..
 Frog   477 DPNIQDKNGRTALH-----WSCNNGYLDAVKLLLGYSAFPNQMENTEE------RYTPLDYALLG 530

  Fly   202 SGEE 205
            ..:|
 Frog   531 GHQE 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 1/3 (33%)
ANK 54..169 CDD:238125 29/96 (30%)
Ank_5 67..120 CDD:290568 16/44 (36%)
ANK repeat 81..112 CDD:293786 11/30 (37%)
Ank_5 100..154 CDD:290568 16/53 (30%)
ANK repeat 114..144 CDD:293786 10/29 (34%)
ANK repeat 147..180 CDD:293786 10/35 (29%)
invsXP_002939636.1 ANKYR <2..135 CDD:223738
ANK repeat 12..41 CDD:293786
ANK repeat 44..74 CDD:293786
ANK repeat 76..142 CDD:293786
ANK repeat 146..175 CDD:293786
PHA03095 161..>456 CDD:222980 15/43 (35%)
ANK repeat 177..214 CDD:293786
ANK repeat 216..248 CDD:293786
ANK repeat 250..282 CDD:293786
ANK repeat 284..312 CDD:293786
ANK repeat 317..344 CDD:293786
ANK repeat 352..383 CDD:293786
ANK repeat 385..416 CDD:293786 1/3 (33%)
ANK repeat 418..449 CDD:293786 11/30 (37%)
Ank_2 423..513 CDD:372319 28/94 (30%)
ANK repeat 451..482 CDD:293786 10/30 (33%)
ANK repeat 484..512 CDD:293786 9/32 (28%)
Ank_2 489..>565 CDD:372319 15/57 (26%)
ANK repeat 517..544 CDD:293786 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.