DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)35Be and caskin2

DIOPT Version :9

Sequence 1:NP_609735.1 Gene:l(2)35Be / 34874 FlyBaseID:FBgn0261881 Length:215 Species:Drosophila melanogaster
Sequence 2:XP_004918519.2 Gene:caskin2 / 100487214 XenbaseID:XB-GENE-1008062 Length:1208 Species:Xenopus tropicalis


Alignment Length:132 Identity:41/132 - (31%)
Similarity:63/132 - (47%) Gaps:12/132 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ERMILWAVNENRISEVREIL--------KLDADT----VNAKDNDGYTPLHRAAYNNFVDMAKLL 101
            |..::.||....:..|:::|        ||...|    ||.:|.||::.||.||.:...::..||
 Frog     4 ENELIQAVKSGDVGTVQKLLAKVRTPKSKLLGSTKRLNVNHQDTDGFSALHHAALSGNSELLHLL 68

  Fly   102 LQYHANPNARTELGWTPLHSACKWNNADCAHLLLQFGADVNAESDGKQTPLHITATVSNCRNTAT 166
            |:..|:.:.:...|..|||.|......:...|||:..|.|||.|...|.|||:.|...:...:.|
 Frog    69 LEMQASVDIKDGNGMRPLHYAAWQGQPEPVRLLLRASASVNAASHDGQIPLHLAAQYGHYEVSET 133

  Fly   167 VL 168
            :|
 Frog   134 LL 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)35BeNP_609735.1 ANK repeat 52..79 CDD:293786 9/38 (24%)
ANK 54..169 CDD:238125 40/127 (31%)
Ank_5 67..120 CDD:290568 19/64 (30%)
ANK repeat 81..112 CDD:293786 10/30 (33%)
Ank_5 100..154 CDD:290568 20/53 (38%)
ANK repeat 114..144 CDD:293786 11/29 (38%)
ANK repeat 147..180 CDD:293786 7/22 (32%)
caskin2XP_004918519.2 Ank_4 7..69 CDD:372654 17/61 (28%)
ANK repeat 7..46 CDD:293786 9/38 (24%)
PHA02875 40..>279 CDD:165206 33/96 (34%)
ANK repeat 48..79 CDD:293786 10/30 (33%)
ANK repeat 81..112 CDD:293786 12/30 (40%)
ANK repeat 114..145 CDD:293786 7/22 (32%)
ANK repeat 150..186 CDD:293786
Ank_2 152..251 CDD:403870
ANK repeat 188..219 CDD:293786
ANK repeat 221..251 CDD:293786
SH3_Caskin2 284..345 CDD:212996
SAM_caskin1,2_repeat1 469..534 CDD:188896
SAM_caskin1,2_repeat2 535..605 CDD:188897
Caskin-Pro-rich 747..831 CDD:407141
FtsN <932..>1010 CDD:225629
Caskin-tail <1175..1208 CDD:406925
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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