DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCTN5-p25 and yrdA

DIOPT Version :10

Sequence 1:NP_723893.1 Gene:DCTN5-p25 / 34873 FlyBaseID:FBgn0040228 Length:189 Species:Drosophila melanogaster
Sequence 2:NP_417738.4 Gene:yrdA / 947775 ECOCYCID:G7696 Length:184 Species:Escherichia coli


Alignment Length:135 Identity:34/135 - (25%)
Similarity:61/135 - (45%) Gaps:13/135 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IIRGDLANVRTGRYCVIGKNSVIRPPYKQFSKGIAFFPMHVGEHVFVGEGAVVSAATIGSYVYIG 111
            :||||:..|:.|....|...|::...:|. |......|:.:||.|.||...::...|||:.|.:|
E. coli    44 VIRGDVHYVQIGARTNIQDGSMLHVTHKS-SYNPDGNPLTIGEDVTVGHKVMLHGCTIGNRVLVG 107

  Fly   112 KNAIIGRRCVLKDCCVIEDGAVLPPETTVSSYMRYTARGTIEGGQGNPYFVPAAMQDEM---INY 173
            ..:|:....:::|..:|..|:::|....:.|...|.         |:|......:.||.   :.|
E. coli   108 MGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYL---------GSPVKQIRPLSDEEKAGLRY 163

  Fly   174 TKSFY 178
            :.:.|
E. coli   164 SANNY 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN5-p25NP_723893.1 LbH_Dynactin_5 13..178 CDD:100049 33/133 (25%)
yrdANP_417738.4 PaaY 5..178 CDD:440427 34/135 (25%)

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