DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ProtB and Prtl99C

DIOPT Version :10

Sequence 1:NP_477051.1 Gene:ProtB / 34867 FlyBaseID:FBgn0013301 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_651735.3 Gene:Prtl99C / 43526 FlyBaseID:FBgn0039707 Length:201 Species:Drosophila melanogaster


Alignment Length:93 Identity:26/93 - (27%)
Similarity:44/93 - (47%) Gaps:14/93 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KVKCAPSQKCSKQGPVTNNAYLNFVRFFRKKHCDLKPQELIAEAAKAWAELPEHRKDRYRR---- 126
            |..|.|..|..|...||||.||||:..::|:...|.||:::..|||.|.:|....|:.::.    
  Fly     8 KEYCPPIYKRQKVARVTNNGYLNFMTEYKKRFYGLSPQDMVHYAAKQWTQLSMAEKEAFKSKKPS 72

  Fly   127 ----------MACKVTTSERHKRRRICK 144
                      :||::.:.....::..|:
  Fly    73 TITLKSPAQYVACEMKSDVAGGQQSSCQ 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ProtBNP_477051.1 Protamine_like 60..>144 CDD:283927 25/91 (27%)
Prtl99CNP_651735.3 Protamine_like 1..125 CDD:283927 26/93 (28%)

Return to query results.
Submit another query.