DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and Slc6a1

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_077347.1 Gene:Slc6a1 / 79212 RGDID:620533 Length:599 Species:Rattus norvegicus


Alignment Length:616 Identity:215/616 - (34%)
Similarity:331/616 - (53%) Gaps:40/616 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VGDDGRST-ASTVEISTNSPALRDNSDDQEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFP 77
            |.|...|| .|...::::.|........::|..:| :|.||....:|||||:..::|||||||||
  Rat     8 VADGQISTEVSEAPVASDKPKTLVVKVQKKAGDLP-DRDTWKGRFDFLMSCVGYAIGLGNVWRFP 71

  Fly    78 FTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFML 142
            :....||||||||||.:.|...|.|::.||..:||::|.|.:.|:.|.|..||||...|...|.|
  Rat    72 YLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWL 136

  Fly   143 STYYAALVAIIGRYFIESFRNPLPWSTCRAEWGIHCINSAPDASNWSQLESNDQRPQNYTMKSQN 207
            :.||..:::....|...||...|||..|...|                  :.|:...||::  .|
  Rat   137 NIYYIVIISWAIYYLYNSFTTTLPWKQCDNPW------------------NTDRCFSNYSL--VN 181

  Fly   208 DRVITSSEWYFVKEVLHEKPNIEEGIGLP---NWELVIGLFIAWSCVFFIIRRGVKSSGKASYFL 269
            ...:||:...|.:..:|:   :.:|:..|   .|.|.|.|.|||..|:|.|.:||..:||..||.
  Rat   182 TTNMTSAVVEFWERNMHQ---MTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVGWTGKVVYFS 243

  Fly   270 ALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSS 334
            |.:||:::.:|..|.|||||:.:||.::|.|.:.|:.|.:||..|.||.|:|..:..|::|...|
  Rat   244 ATYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIALGS 308

  Fly   335 FNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAI 399
            :|.|.:||:||:.||..:::.||:.|||.||.|:|.:|| :....|..|...|.||||::||:|:
  Rat   309 YNSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAH-VTKRSIADVAASGPGLAFLAYPEAV 372

  Fly   400 AKFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDRFPNFGQWQCSLLIA---VVSFFIGL 461
            .:....| ::::|||.||.:|||.|........:||:.|.:|...:.:..|.||   :||:.|||
  Rat   373 TQLPISP-LWAILFFSMLLMLGIDSQFCTVEGFITALVDEYPRLLRNRRELFIAAVCIVSYLIGL 436

  Fly   462 MYITPGGQYMLTLVDFFGAS-MIALVLGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWS 525
            ..||.||.|:..|.|::.|| |..|.|...|..:|.|.||.:|...:|:.|:|.:..::|:||||
  Rat   437 SNITQGGIYVFKLFDYYSASGMSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWS 501

  Fly   526 IITPLIMTVILIYFYATYQPLTYNNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLGA 590
            ..||:|:..:.::......|||..:.|:|.|...:|||:....::.:|.:|....:...| :|..
  Rat   502 FFTPIIVAGVFLFSAVQMTPLTMGSYVFPKWGQGVGWLMALSSMVLIPGYMAYMFLTLKG-SLKQ 565

  Fly   591 KIRGAFTPKKNW-----GPSDPLLREQYHKE 616
            :::....|.::.     ||..|.......||
  Rat   566 RLQVMIQPSEDIVRPENGPEQPQAGSSASKE 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 201/554 (36%)
Slc6a1NP_077347.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 5/14 (36%)
SLC6sbd_GAT1 2..599 CDD:212075 215/616 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599 5/20 (25%)
PDZ-binding 597..599 215/616 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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