DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and slc6a9

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_005163551.1 Gene:slc6a9 / 494490 ZFINID:ZDB-GENE-050105-3 Length:653 Species:Danio rerio


Alignment Length:639 Identity:230/639 - (35%)
Similarity:339/639 - (53%) Gaps:80/639 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DQEAAKVPEE---------RATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIV 95
            ||..| ||.|         |..||..:||:::.:..:||||||||||:....||||||:.||.|:
Zfish    13 DQNGA-VPGEPVKRDENSRRGNWGNQIEFVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIM 76

  Fly    96 LFLIGKPIYYLEMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIES 160
            |...|.|:::||:..|||:|.|.:.|:.:.|..||||.|.......:..||..::.|...||..|
Zfish    77 LVFCGIPLFFLELSFGQFTSLGCLGVWKVSPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFMS 141

  Fly   161 FRNPLPWSTCRAEWGIHCINSAPDAS-------------NWSQLESNDQRPQNYTMKSQNDRVIT 212
            ..|.|||:.|...|      :.||.|             |.|.:.|......|.|.::      :
Zfish   142 MTNLLPWTYCNNPW------NTPDCSGVVSTHRANATFANMSAVVSGVTEIVNRTKRT------S 194

  Fly   213 SSEWYFVKEVLHEKPNIEEGIG------LPNWELVIG-LFIAWSCVFFIIRRGVKSSGKASYFLA 270
            .||.|:...||    ||.:|||      ||    ::| |.::|..||..:.||||||||..||.|
Zfish   195 PSEEYWRNYVL----NISDGIGNFGEVRLP----ILGCLAVSWFVVFLCLIRGVKSSGKVVYFTA 251

  Fly   271 LFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSF 335
            .||||::.:|.:|.:||.|:|.||.|::.|||.||||.|||..|.:|.||||...:|.:|..:|:
Zfish   252 TFPYVVLTILFIRGITLDGAISGIKYYLTPQWQKILDAKVWGDAASQIFYSLGCAWGGLITMASY 316

  Fly   336 NKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIA 400
            |||.:|..||:.|::..:..||:.|||.||.|||.:||.:|. |:..|...|.||||::||:|:.
Zfish   317 NKFHNNCFRDSIIISVTNCGTSVYAGFVIFSILGFMAHHLGV-DVSEVADHGPGLAFVAYPEALT 380

  Fly   401 KFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDRFPNFGQW------QCSLLIAVVSFFI 459
            .....| ::|:|||.||.:||:|:...:....|||:.|....  .|      ..:|.:|::.|.:
Zfish   381 LLPISP-LWSLLFFFMLILLGLGTQFCLLETLVTAVVDEIGT--DWIIKNKTYVTLGVAIIGFLL 442

  Fly   460 GLMYITPGGQYMLTLVDFFGASMIALVLGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCW 524
            |:...|..|.|.|.|:|.:.||...:::.......|.::||.....||:|.|||....:::|:||
Zfish   443 GVPLTTQAGIYWLLLMDNYAASFSLVIISCIMCICIMYVYGHKNYFKDVEMMLGFPPPIFFRICW 507

  Fly   525 SIITPLIMTVILIYFYATYQPLTYNNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLG 589
            ..::|.|:|.|||:....|:|:|||:.|||.||..||:.:....::.:||:.:..|....|.|..
Zfish   508 RYVSPFIITFILIFTVIQYKPITYNDYVYPGWSLVIGFAMALSSVICIPIYALFKIAMSEGSTFL 572

  Fly   590 AKIRGAFTPKKNWGPS-------------------DPLLREQYHKEIENELTPK 624
            .:::.:..|..:|||:                   .| |:|....|.:::||.|
Zfish   573 ERLKNSVKPDPDWGPALQEHRKGRYATAGPESVEVSP-LKEDLKDEGKDKLTEK 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 213/573 (37%)
slc6a9XP_005163551.1 SLC6sbd_GlyT1 15..598 CDD:212067 221/607 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.