DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and slc6a1b

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:546 Identity:205/546 - (37%)
Similarity:309/546 - (56%) Gaps:39/546 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYY 105
            |:..::| :|.||....:||:||:..::|||||||||:....||||||||||.:.|...|.|:::
Zfish    35 QKKKELP-DRETWQGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFF 98

  Fly   106 LEMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPWSTC 170
            ||..:||::|.|.:.|:.|.|..||||...|...|.|:.||..::|....|...||...|||.:|
Zfish    99 LETALGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTDLPWKSC 163

  Fly   171 RAEWGIHCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVLH------EKPNI 229
            ...|                  :.|:...||:|.:..:  :||:...|.:..:|      |||. 
Zfish   164 DNPW------------------NTDKCFSNYSMANIGN--MTSAVVEFWERNMHQLTDGLEKPG- 207

  Fly   230 EEGIGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGI 294
              .|.||   |.|.|.|||..|:|.|.:||..:||..||.|.:||.::.:|.:|.|||||:.:||
Zfish   208 --EIRLP---LAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGI 267

  Fly   295 YYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLL 359
            .:::.|::.|:.:.:||..|.||.|:|..:..|::|...|:|.|.:||::|:.||..:::.||:.
Zfish   268 LFYVTPEFSKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYKDSIIVCCINSFTSMF 332

  Fly   360 AGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGS 424
            |||.||.|:|.:|| |....|..|...|.||||::||:|:.:....| :::||||.||.:|||.|
Zfish   333 AGFVIFSIVGFMAH-ITKRPIADVAASGPGLAFLAYPEAVTQLPISP-LWAVLFFSMLLMLGIDS 395

  Fly   425 NIAMTSCSVTAIRDRFPNFGQWQCSLLIAV---VSFFIGLMYITPGGQYMLTLVDFFGAS-MIAL 485
            ........:||:.|.||...:.:..:.|||   ||:.|||..||.||.|:..|.|::.|| |..|
Zfish   396 QFCTVEGFITALVDEFPRALRGRREIFIAVVCLVSYLIGLSNITQGGLYVFKLFDYYSASGMCLL 460

  Fly   486 VLGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTYNN 550
            .|...|..:|.|.||.::...::|.|:|.|..::|:|||.:.||||:..:.::......|||.||
Zfish   461 FLVFFECVSISWFYGVNKFYGNLEEMIGYKPCIWWKLCWVVFTPLIVAGVFLFSAVQMVPLTLNN 525

  Fly   551 IVYPNWSYSIGWLITAFGILQLPIWM 576
            .|:|.|...:||.:....::.:|.:|
Zfish   526 YVFPKWGQGVGWCMALSSMVLIPGYM 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 203/537 (38%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:294310 205/546 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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