DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and List

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_611364.2 Gene:List / 37157 FlyBaseID:FBgn0034381 Length:564 Species:Drosophila melanogaster


Alignment Length:588 Identity:289/588 - (49%)
Similarity:395/588 - (67%) Gaps:40/588 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VEISTNSPALRDNSDDQEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFL 89
            :|||..|         ::.|:.|.|:  ||.|:|||.|||::||||||:||||:.|..||||.|:
  Fly     4 LEISKKS---------EKPAEKPAEQ--WGNGLEFLFSCISLSVGLGNIWRFPYIAFQNGGGTFV 57

  Fly    90 IPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIG 154
            |||||.|.:||:|:||||:.:|||:.||.||.||:.|.:|||..||........|||::::|:..
  Fly    58 IPYLIALLVIGRPVYYLEISLGQFTGRGVVKAFDMAPLLKGVALGQVLATAASITYYSSIMALTL 122

  Fly   155 RYFIESFRNPLPWSTCRAEWGIHCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFV 219
            |:::.||.:.||||.|...||..|               :|...||.:.|      ::.::.||.
  Fly   123 RFWLASFGSELPWSRCWESWGTDC---------------HDGNAQNSSGK------MSPAQLYFE 166

  Fly   220 KEVLHEKPNIEEGIGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRA 284
            :|:|||.|||:.|:.||||:||..|.|||..:..::.||:||||||:|||.:||||::.:||:||
  Fly   167 REILHEVPNIDNGLSLPNWQLVACLAIAWLVIGGVLIRGIKSSGKAAYFLGVFPYVVLLILLLRA 231

  Fly   285 VTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIV 349
            |||||:||||.||.||||.::|:|.||||||||.|:||::|||.:|.|:|:|.|..||:.|..|:
  Fly   232 VTLPGAIDGIIYFFKPQWRELLNPLVWYAAVTQVFFSLAICFGTLITYASYNNFNRNVYNDIVII 296

  Fly   350 TGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFF 414
            |.:|:.:|::||...|||||:||.|.|..||||||||||||||||||:|||||:.:||:|:||||
  Fly   297 TTMDSCSSIIAGCITFGILGNLARETGNPDIGSVVKGGAGLAFISYPEAIAKFEYVPQMFAVLFF 361

  Fly   415 LMLFVLGIGSNIAMTSCSVTAIRDRF----PNFGQWQCSLLIAVVSFFIGLMYITPGGQYMLTLV 475
            ||||||||||.:.|.||.:..|||:|    |..  |:.:..:.|:.|.:.::|:|||||::|.||
  Fly   362 LMLFVLGIGSTVGMGSCILRVIRDQFGLRSPPI--WKLASGLTVLGFSVSIVYMTPGGQFILNLV 424

  Fly   476 DFFGASMIALVLGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFY 540
            ||:|.|..||:|.|.||..:.||||.:|.|:||:||:|.:.|.||||||..|||.:||.:|||..
  Fly   425 DFYGVSFTALILAIGELVAVAWIYGVNRFCEDIKFMMGIETGWYWRLCWRFITPGLMTAVLIYML 489

  Fly   541 ATYQPLTYNNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQ--TLGAKIRGAFTPKKNWG 603
            .....|.|..:.||..::..|..:...|::|||.|.|.||.:..|.  :...:||.|..|...||
  Fly   490 LDMSALEYKGVGYPTLAHVFGCFLATLGLIQLPGWAIYAIYKKRGHNGSFWQRIRAACKPSDTWG 554

  Fly   604 PSD 606
            |::
  Fly   555 PAN 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 278/553 (50%)
ListNP_611364.2 SLC6sbd 19..489 CDD:271359 262/494 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469623
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D14202at7147
OrthoFinder 1 1.000 - - FOG0008552
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.