DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and Slc6a18

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_058859.2 Gene:Slc6a18 / 29323 RGDID:69352 Length:615 Species:Rattus norvegicus


Alignment Length:658 Identity:192/658 - (29%)
Similarity:315/658 - (47%) Gaps:131/658 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVI 110
            :.:||..|...:::|:|||..:|||||:||||:....:|||||||||.|.|...|.|::|:|:.|
  Rat    13 IEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCHTHGGGAFLIPYFIALVFEGIPLFYIELAI 77

  Fly   111 GQFSSRGSVKVF-DLCPAMKGVGAGQAFQV-FMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAE 173
            ||...|||:.|: .:.|.:.|||.| .|.| |::|.||..::..:..:|:.||::|||||||.. 
  Rat    78 GQRLRRGSIGVWKTISPYLGGVGLG-CFSVSFLVSLYYNTILLWVLWFFLNSFQHPLPWSTCPL- 140

  Fly   174 WGIHCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVLHEKPNIEEGIGLPNW 238
                                 |.....:..:.|:...: |..||  ::.|:...:| ...|...|
  Rat   141 ---------------------DLNRTGFVQECQSSGTV-SYFWY--RQTLNITSDI-SNTGTIQW 180

  Fly   239 ELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWG 303
            :|.:.|...|:.|:..:.||::|:||..||.|||||:::.:.|:|.:||||:.:|:.|...|...
  Rat   181 KLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLTYLFTPNMK 245

  Fly   304 KILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGIL 368
            .:.:|:||..|.||.|:|||:.||..|.::|:|:..:|..:||..:..:::||||.|..|||.|:
  Rat   246 ILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNQPRNNCEKDAVTIALVNSMTSLYASITIFSIM 310

  Fly   369 GHLAH-----------------------EIGTDDIGSVV-------------------------- 384
            |..|.                       .|..|:..||:                          
  Rat   311 GFKASNDYGRCLDRNILSLINEFDFPELSISRDEYPSVLMYLNATQPERVARLPLKTCHLEDFLD 375

  Fly   385 --KGGAGLAFISYPDAIAKFKNLP--QIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDR--FP-N 442
              ..|.|||||.:.:|:.   ::|  .::|||||.|||.||:.|........:|.:.|.  .| .
  Rat   376 KSASGPGLAFIVFTEAVL---HMPGASVWSVLFFGMLFTLGLSSMFGNMEGVITPLFDMGILPKG 437

  Fly   443 FGQWQCSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALVLGIAELYTIGWIYGTDRLCKD 507
            ..:...:.::..:.|...:.:....|.|.|.:.|.|.||:..::....|:..:..:||..|.|.|
  Rat   438 VPKETMTGVVCFICFLSAICFTLQSGSYWLEIFDSFAASLNLIIFAFMEVVGVIHVYGIKRFCDD 502

  Fly   508 IEFMLGRKVGLYWRLCWSIITPLIMTVILIYF----------YATYQPLTYNNI------VYPNW 556
            ||:|.||:..|||::.|.:::|:::..|.:.:          |..:.| .|.:.      :||.|
  Rat   503 IEWMTGRRPSLYWQVTWRVVSPMLLFGIFLSYIVLLAQSSPSYKAWNP-QYEHFPSREEKLYPGW 566

  Fly   557 SYSIGWLITAFGILQLP-IWMIVAIVRDPGQTLGAKIRGAFTPKKNWGPSDPLLREQYHKEIENE 620
             ..:..::.:|    || :|:       ||..|...:   |..::.|          .:..:|:.
  Rat   567 -VQVTCVLLSF----LPSLWV-------PGIALAQLL---FQYRQRW----------KNTHLESA 606

  Fly   621 LTPKRGQG 628
            |.|:..:|
  Rat   607 LKPQESRG 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 186/622 (30%)
Slc6a18NP_058859.2 SLC6sbd_B0AT3 16..591 CDD:212086 186/617 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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