DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and Slc6a2

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_033235.3 Gene:Slc6a2 / 20538 MGIID:1270850 Length:617 Species:Mus musculus


Alignment Length:571 Identity:202/571 - (35%)
Similarity:320/571 - (56%) Gaps:32/571 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SDDQEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKP 102
            |.|.:|    :.|.||||.::||:|.:..:|.|.||||||:....||||||||||.:.|.:.|.|
Mouse    48 SQDSDA----QPRETWGKKIDFLLSVVGFAVDLANVWRFPYLCYKNGGGAFLIPYTLFLIIAGMP 108

  Fly   103 IYYLEMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPW 167
            ::|:|:.:||::..|:..|:.:||..||||.........:..||..::|....|...||...|||
Mouse   109 LFYMELALGQYNREGAATVWKICPFFKGVGYAVILIALYVGFYYNVIIAWSLYYLFASFTLNLPW 173

  Fly   168 STCRAEWGI-HCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEV--LHEKPNI 229
            :.|...|.. :|.:  |...|.|.|       .::|..|:..  .|.:..::.:.|  |||...|
Mouse   174 TNCGHSWNSPNCTD--PKLLNASVL-------GDHTKYSKYK--FTPAAEFYERGVLHLHESSGI 227

  Fly   230 EEGIGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGI 294
            .: ||||.|:|::.|.:....::|.:.:|||:|||..:..|..||.::.||||..|||||:.:||
Mouse   228 HD-IGLPQWQLLLCLMVVIVVLYFSLWKGVKTSGKVVWITATLPYFVLFVLLVHGVTLPGASNGI 291

  Fly   295 YYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLL 359
            ..::...:.::.:..||..|.||.|:||...||.:|.::|:|||.:|.:|||.:.:.::.:||.:
Mouse   292 NAYLHIDFYRLKEATVWIDAATQIFFSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFI 356

  Fly   360 AGFTIFGILGHLAHE--IGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGI 422
            :||.||.|||::|||  :..:|:.:   .||||.||.||:||:.... ...::|||||||..||:
Mouse   357 SGFAIFSILGYMAHEHKVNIEDVAT---EGAGLVFILYPEAISTLSG-STFWAVLFFLMLLALGL 417

  Fly   423 GSNIAMTSCSVTAIRDRFPNFGQ----WQCSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMI 483
            .|::......:|.:.|.|....:    :.|  ::.:.:|.:.|..||.||.|:|||:|.|.|...
Mouse   418 DSSMGGMEAVITGLADDFQVLKRHRKLFTC--VVTISTFLLALFCITKGGIYVLTLLDTFAAGTS 480

  Fly   484 ALVLGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTY 548
            .|...:.|...:.|.||.||...||:.|:|.|.||||||||..::|..:..:::.....::||||
Mouse   481 ILFAVLMEAIGVSWFYGVDRFSNDIQQMMGFKPGLYWRLCWKFVSPAFLLFVVVVSIINFKPLTY 545

  Fly   549 NNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGAFTPK 599
            ::..||.|:..:||.|....::.:|.::|...:...| :|..::....||:
Mouse   546 DDYTYPPWANWVGWGIALSSMILVPAYVIYKFLSIRG-SLWERVAYGITPE 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 197/556 (35%)
Slc6a2NP_033235.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
SLC5-6-like_sbd 56..615 CDD:382020 199/559 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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