DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and snf-11

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_505873.2 Gene:snf-11 / 191770 WormBaseID:WBGene00004910 Length:610 Species:Caenorhabditis elegans


Alignment Length:589 Identity:207/589 - (35%)
Similarity:303/589 - (51%) Gaps:47/589 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYL 106
            ||..| .||..|....:|:||||..::|||||||||:....||||||||||.|.|...|.|::.|
 Worm     3 EATSV-AEREQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCGAPLFIL 66

  Fly   107 EMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESF-RNPLPWSTC 170
            |...||..|.|.:.:|.:||..||||...|...|.|:.||..:::....|...|| .:.:||..|
 Worm    67 ETSWGQLMSVGGLGMFKICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNSFTMSDVPWKNC 131

  Fly   171 RAEWGI-HCIN---SAPDASNWSQLE-------SNDQ-----------RPQNYTMKSQNDRVITS 213
            ...|.. :|.:   ..|..||.:..|       ::|.           ...|:|:.|..|..:.|
 Worm   132 DHAWNTPNCRSEYVKIPCDSNRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVCSAADLSVVS 196

  Fly   214 SEWYFVKEVL-HEKPNIEEGIGLP---NWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPY 274
            .    |||.. |....|..|:..|   .|:|.:.|.:.|...:..|.:|||.:||..|..|.|||
 Worm   197 P----VKEFWNHRVLGISSGLENPGGIRWDLALFLLLVWIICYLCIFKGVKWTGKVVYITASFPY 257

  Fly   275 VIMGVLLVRAVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFG 339
            :::..||:|.:||.|:..|:.:::||.:.|:|:.|||..||||.|:|..:..|.::...|:|||.
 Worm   258 MMLFCLLIRGLTLEGAGVGLEFYLKPDFSKLLESKVWVDAVTQVFFSYGLGLGALVALGSYNKFN 322

  Fly   340 HNVHRDAAIVTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKN 404
            :||::.|..|..:::.||:.|||.||..:|.:|.: ....:..|.:.|.||.|::||..|.:   
 Worm   323 NNVYKQALTVCFVNSGTSVFAGFVIFSFIGFMATQ-QEKSVAEVAQAGPGLLFLAYPSGILQ--- 383

  Fly   405 LP--QIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDRFP-----NFGQWQCSLLIAVVSFFIGLM 462
            ||  |.:|.|||||:..||:.|.........|||.|.||     .:|:.....:|.|:|:.|||.
 Worm   384 LPYTQFWSCLFFLMVLFLGVDSQFCTMEGFFTAIIDEFPQIRRKKYGREIFVGVICVISYLIGLT 448

  Fly   463 YITPGGQYMLTLVDFFGASMIALV-LGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSI 526
            .:|.||.|:..|.||:.||..||: |...|...|.|..|.||..:.::.|:|.....:|:.||..
 Worm   449 TVTEGGFYVFQLFDFYAASGWALLWLLFFECIAISWSLGIDRWYEHMKSMIGYYPSAWWKFCWVF 513

  Fly   527 ITPLIMTVILIYFYATYQPLTYN--NIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLG 589
            .||.:...:|::....||||..:  |..||.|.:..||.::...:|.:|.:.|....:.|| |:.
 Worm   514 ATPSVCFGVLLFGLIKYQPLRIDAYNYDYPVWGHIFGWFLSLSSMLCIPGYAIWIWFKTPG-TVQ 577

  Fly   590 AKIR 593
            .||:
 Worm   578 EKIK 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 203/581 (35%)
snf-11NP_505873.2 SLC6sbd-TauT-like 10..586 CDD:271387 203/581 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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