DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and snf-11

DIOPT Version :10

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_505873.2 Gene:snf-11 / 191770 WormBaseID:WBGene00004910 Length:610 Species:Caenorhabditis elegans


Alignment Length:589 Identity:207/589 - (35%)
Similarity:303/589 - (51%) Gaps:47/589 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYL 106
            ||..| .||..|....:|:||||..::|||||||||:....||||||||||.|.|...|.|::.|
 Worm     3 EATSV-AEREQWSSWADFIMSCIGYAIGLGNVWRFPYLCYQNGGGAFLIPYCISLVFCGAPLFIL 66

  Fly   107 EMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESF-RNPLPWSTC 170
            |...||..|.|.:.:|.:||..||||...|...|.|:.||..:::....|...|| .:.:||..|
 Worm    67 ETSWGQLMSVGGLGMFKICPIFKGVGIAAAVMAFWLNIYYIVVLSWAATYLYNSFTMSDVPWKNC 131

  Fly   171 RAEWGI-HCIN---SAPDASNWSQLE-------SNDQ-----------RPQNYTMKSQNDRVITS 213
            ...|.. :|.:   ..|..||.:..|       ::|.           ...|:|:.|..|..:.|
 Worm   132 DHAWNTPNCRSEYVKIPCDSNRTIAEFFNVKVLTHDHIHEYKKQFFVGEKMNWTVCSAADLSVVS 196

  Fly   214 SEWYFVKEVL-HEKPNIEEGIGLP---NWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPY 274
            .    |||.. |....|..|:..|   .|:|.:.|.:.|...:..|.:|||.:||..|..|.|||
 Worm   197 P----VKEFWNHRVLGISSGLENPGGIRWDLALFLLLVWIICYLCIFKGVKWTGKVVYITASFPY 257

  Fly   275 VIMGVLLVRAVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFG 339
            :::..||:|.:||.|:..|:.:::||.:.|:|:.|||..||||.|:|..:..|.::...|:|||.
 Worm   258 MMLFCLLIRGLTLEGAGVGLEFYLKPDFSKLLESKVWVDAVTQVFFSYGLGLGALVALGSYNKFN 322

  Fly   340 HNVHRDAAIVTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKN 404
            :||::.|..|..:::.||:.|||.||..:|.:|.: ....:..|.:.|.||.|::||..|.:   
 Worm   323 NNVYKQALTVCFVNSGTSVFAGFVIFSFIGFMATQ-QEKSVAEVAQAGPGLLFLAYPSGILQ--- 383

  Fly   405 LP--QIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDRFP-----NFGQWQCSLLIAVVSFFIGLM 462
            ||  |.:|.|||||:..||:.|.........|||.|.||     .:|:.....:|.|:|:.|||.
 Worm   384 LPYTQFWSCLFFLMVLFLGVDSQFCTMEGFFTAIIDEFPQIRRKKYGREIFVGVICVISYLIGLT 448

  Fly   463 YITPGGQYMLTLVDFFGASMIALV-LGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSI 526
            .:|.||.|:..|.||:.||..||: |...|...|.|..|.||..:.::.|:|.....:|:.||..
 Worm   449 TVTEGGFYVFQLFDFYAASGWALLWLLFFECIAISWSLGIDRWYEHMKSMIGYYPSAWWKFCWVF 513

  Fly   527 ITPLIMTVILIYFYATYQPLTYN--NIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLG 589
            .||.:...:|::....||||..:  |..||.|.:..||.::...:|.:|.:.|....:.|| |:.
 Worm   514 ATPSVCFGVLLFGLIKYQPLRIDAYNYDYPVWGHIFGWFLSLSSMLCIPGYAIWIWFKTPG-TVQ 577

  Fly   590 AKIR 593
            .||:
 Worm   578 EKIK 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:444915 203/581 (35%)
snf-11NP_505873.2 SLC6sbd-TauT-like 10..586 CDD:271387 203/581 (35%)

Return to query results.
Submit another query.