DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and snf-6

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001367976.1 Gene:snf-6 / 191768 WormBaseID:WBGene00004905 Length:714 Species:Caenorhabditis elegans


Alignment Length:687 Identity:183/687 - (26%)
Similarity:321/687 - (46%) Gaps:93/687 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DTTQRNHQNLAFVGDDGRSTASTVEISTNSPALRDNSDDQEAAKVP------------EE----- 49
            |..|||.:        |.::.:.|::|...|.::     |..||:|            ||     
 Worm     7 DPEQRNGR--------GMASGNNVDMSLYPPFIK-----QLDAKLPDYTREGDIEYPFEEITGVG 58

  Fly    50 -----RATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMV 109
                 |..|....::|::.|..:.|:|:.|:|||....:||.|||:|||.:|.|...|::::|||
 Worm    59 DENRIRGNWSNKSDYLLAVIGFTAGVGSFWKFPFLVFQHGGAAFLVPYLCMLCLASLPMFFMEMV 123

  Fly   110 IGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGR----YFIESFRNPLPWSTC 170
            :|||||..::.|:.:.|..||:|..|.    .:|.::|....||..    |.|.||...:|||.|
 Worm   124 LGQFSSSAAISVWKVVPLFKGIGFAQV----TISGFFAVFFNIISAWTLFYLINSFSFSIPWSNC 184

  Fly   171 RAEWG---------IHC--------INSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYF 218
            ...|.         |.|        :|.:....:.|..|:        |:...:|.....|..||
 Worm   185 ANSWSGENCTLGTRIQCKEMNGTLLVNGSCIVEHASSNET--------TVIPLHDLGSIPSLKYF 241

  Fly   219 VKEVLHEKPNIEEGIGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVR 283
            ..:||.....::: .|..||.|.:.:...|..||..:.:|||||||..|...:.|::|:.|||.|
 Worm   242 HNDVLMLSKGVDD-FGTLNWYLGLCVLACWIAVFLCLFQGVKSSGKVVYVAVIVPFIILTVLLTR 305

  Fly   284 AVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAI 348
            .:||.||:..::||:.|:|..::|..||..|..|.|||:|.|.|.:...:|:::|.:|:::|..:
 Worm   306 LLTLDGSLAAVFYFLTPKWEILMDLHVWGEAAVQAFYSVSCCSGGLFTIASYSRFHNNIYKDIWL 370

  Fly   349 VTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLF 413
            |..:|.:.||:.....|..:|...:|.........::.|..|.|:...:|:|.....| :::.||
 Worm   371 VLIVDVIVSLVGCLLTFSAIGFTCYEFAISLDKFHIRDGFHLVFVFLAEALAGVSVAP-LYAGLF 434

  Fly   414 FLMLFVLGIGSNIAMTSCSVTAIRDRFP-NFGQWQCSLLIAVVSFFI--GLMYITPGGQYMLTLV 475
            |:|:.::...:.:.:....|::|.|.:| ...:.:..:|..|.:.||  .:.:....|.:.:.|:
 Worm   435 FIMILLVVHATQMFVVETIVSSICDEYPERLRRNRRHVLTTVCALFILLSIPFCLSSGLFWMELL 499

  Fly   476 DFFGASMIALVLGIAELYTIGWIYGTDRLCKDIEFMLG--RKVGLYWRLCWSIITPLIMTVILIY 538
            ..|..:...:|:...|...|.|:||.|.:..:.::::|  ....::|::.:..|.|::...||.:
 Worm   500 TQFVLTWPLVVIAFLECMAINWVYGVDNMLDNAKWIVGYWPPCYIFWKILFKFICPMVYLAILCF 564

  Fly   539 FYATYQPLTYNNIVYPNWSYSIGWLITAFGILQLP---IWMIVAIVRDPGQTLGAKIRGAFTPKK 600
            .:..:..:.|.:..:|.||....|.|.:|.::.:|   ||.. .|.:.   |:..|......|..
 Worm   565 LWLDWNSIQYESYQFPYWSILTAWCIASFPLILIPIVGIWQF-CIAKG---TITQKWWRVLYPDD 625

  Fly   601 NWGPSDPLLR-EQYHKEI----------ENELTPKRG 626
            .|||:..:.| |::..:|          |.|:...||
 Worm   626 AWGPAMAIHRAEKFPLQIPEARRLLLPPEVEIASSRG 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 158/576 (27%)
snf-6NP_001367976.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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