DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and F56F4.3

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_491770.3 Gene:F56F4.3 / 186398 WormBaseID:WBGene00018980 Length:701 Species:Caenorhabditis elegans


Alignment Length:726 Identity:135/726 - (18%)
Similarity:263/726 - (36%) Gaps:176/726 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDTTQRNHQN----LAFVGDDGRSTASTVEISTNSPALRDNSDDQEAAKVPEERATWGKGVEFLM 61
            ||:|:.:.:|    ..|..|:..:.:.|...:.|...:.....:||.......|.:..:.:..|:
 Worm    52 MDSTESSSENPDGIEKFDNDEELAISPTGNPNLNPSKIEAEELEQEIGSRNISRPSTYRQLSLLL 116

  Fly    62 SCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVFDLCP 126
            ||:.:   |.|...|.....::||..|.:||.|:||::|.|:...|:.:.||||.....:|....
 Worm   117 SCVTL---LKNNMVFIECFFNHGGVYFFVPYFIILFVLGVPMAIFELSLAQFSSIPMNGMFTRMA 178

  Fly   127 AMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRN-------PLPWSTCRAEWGIHCINSAPD 184
            .|.|   |..:.:..|...|...:|...|:.:.::::       .:.|..|....|:.|.:    
 Worm   179 PMLG---GIPWLILCLRIIYTVYIAFDPRFLLYAYKSFVTVITGNMNWIHCDDYKGVRCFD---- 236

  Fly   185 ASNWSQLESNDQRPQNYTMKSQNDRVITSSEWY---------------FVKEVLHEKPNIEEGIG 234
             ..|| .:.|:.|.....:|..:.|.:...:.|               .:...::::.|     |
 Worm   237 -PTWS-CKINEFRLNGECVKDVHIRKLAQQQDYGLLTYFGLREYRLISIIPSQIYKEIN-----G 294

  Fly   235 LPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFI- 298
            |...:.::...:......||..:|.:.....:.|....|  |:|  ::.||.|      :||.: 
 Worm   295 LDIMDNILAALVFLLIAGFITYKGHRFFASLAGFFVFLP--ILG--MIPAVIL------VYYDVG 349

  Fly   299 --KPQW----------GKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTG 351
              |..:          .||.:...|..|......::.:..|.::...|...|.||..:||.::..
 Worm   350 SRKKHFFNQILKNNDITKIFELSAWLNAARVTVKTVYIADGTLMALGSRADFRHNFIKDAVLLAA 414

  Fly   352 LDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDA--------IAKFKNLPQI 408
            ......||..|.|..|| ::|::                  |.||.|        :.:|..:...
 Worm   415 SGATYRLLLCFGILPIL-YVAND------------------ILYPFAKTVYARGDLVQFHAIELF 460

  Fly   409 FSVL-------------FFLMLFVLG------IGSNIAMTSCSVTAIRDRFPNF-----GQWQCS 449
            ||.|             ||:...:.|      :...:......:.|:...||..     ...:..
 Worm   461 FSALPSYAIPGISPTVTFFVYAMLYGTINFAFVAYQVITFEMLINALHHLFPRLLYLKQKSVRIC 525

  Fly   450 LLIAVVS-----FFIGLMY--ITPGGQYMLTLVDFFGASMIALVLGIA------ELYTIGWIYGT 501
            :::|.|:     :.:.|.|  :..|.|..|.:.|:        |:|:.      :|.::..:||.
 Worm   526 IIMATVTLLLFLYILSLPYKQLAVGYQKELAIDDY--------VVGLVSTTVFIQLISVSIVYGY 582

  Fly   502 DRLC---------KDIEFMLGRKVGLYWRLCWSIITPLIMTV----ILIYFYATYQPLTYNNIVY 553
            .||.         ..:.:.|..|..::..:.|:...|:...|    |::..|..|          
 Worm   583 KRLLINFLTMLKHHPVTYKLVEKCRVFLYVMWAFFLPISCLVSICSIIVKKYQIY---------- 637

  Fly   554 PNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGAFTPKKNWGPSDPLLREQYHKEIE 618
             :|...:...|:|..::.|...:.:.|:|       .:.....:....|.|::    |.:.:|:|
 Worm   638 -HWPLVLYAAISALPLIYLARKLTMYIMR-------KEFVSGLSQTHRWQPAN----EGHAREVE 690

  Fly   619 NELTPKRGQGI 629
            ::   :|..|:
 Worm   691 HD---ERASGV 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 118/640 (18%)
F56F4.3NP_491770.3 SLC5-6-like_sbd 73..620 CDD:382020 111/600 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.