DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and snf-9

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_503077.2 Gene:snf-9 / 178512 WormBaseID:WBGene00004908 Length:713 Species:Caenorhabditis elegans


Alignment Length:653 Identity:190/653 - (29%)
Similarity:318/653 - (48%) Gaps:81/653 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TQRNHQNLAFVGDDGRSTASTVEISTNSPALRDNSDDQEAAKVPEERATWGKGVEFLMSCIAMSV 68
            |||...:.:...:|.|...:.|..|.:|..:.::..|       ..|..||..:|||:|.:.|:|
 Worm    12 TQRRSPSDSSAAEDQRIATTIVRDSGSSKEIEESQAD-------PCRGAWGNQIEFLLSTLGMAV 69

  Fly    69 GLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVF-DLCPAMKGVG 132
            ||||:||||..|.:|||.|||:||:....|.|.|..|||.::||:....:..:| ...|.::|||
 Worm    70 GLGNIWRFPTRAYNNGGSAFLVPYVACALLFGLPAVYLEFLLGQYHRTTAPIIFRRFAPILQGVG 134

  Fly   133 AGQAFQVFMLSTYYAALVAIIG--RYFIES--FRNPLPWSTCRAEW--GIHCINSA--PDASN-- 187
            ........:::.||   :.|||  ..::.|  ..:...|:.|...|  ...|::|.  |..::  
 Worm   135 WMAVAVSSLVAIYY---IIIIGWSTVYMASIVMGHTSKWNRCGNSWNNAESCVDSGLQPLCASFN 196

  Fly   188 ---------WSQLESNDQRPQNY-----------TMKSQNDRVITSSEWYFVKEVLHEKPNIEEG 232
                     |:.| |::.|.:.|           .::....::|.::|.||...|:.......|.
 Worm   197 ATGNETSPVWANL-SSEGRGKFYIYLNTSCYDKVDLEFNKTKMIAATEQYFFDYVVKPTDGFLEF 260

  Fly   233 IGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYF 297
            ..: |::...|:...|..|..|:.:||...|||||.:...||.|:.:|..|.:||.|:.|||||:
 Worm   261 SSI-NFKSFFGMNACWLIVVLILWKGVGYMGKASYVIVTLPYFIIILLFFRGITLDGAEDGIYYY 324

  Fly   298 I-KPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAG 361
            : .|.|.|:..|..|..|:.|..:||.:.:|.:|..:||:|..:|..|||.||...|||.||:.|
 Worm   325 LGNPDWSKVFMPATWGEALKQLCFSLGIGYGGLIGMASFSKPNNNCFRDALIVIIGDTMMSLVGG 389

  Fly   362 FTIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNI 426
            ..:|..||.||.:.|. .:..||..|..|||:::|:|:.:.. ||:::|.|||||||.|||.:.:
 Worm   390 AAVFSTLGFLAKKKGC-SVAEVVNDGFSLAFVAFPEALGRMP-LPELWSFLFFLMLFFLGISTEV 452

  Fly   427 AMTSCSVTAIRDRFPNF--GQWQCSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALVLGI 489
            |..:...::|.|:|.|.  .:|..::|..:|.:.:|::.:|.||.|...:.|.:.|.:.:.....
 Worm   453 AYVNVFCSSICDQFVNLRKRKWLVAVLWCLVLYVLGVVMVTDGGFYWFIMFDEYAAGVSSCCAVT 517

  Fly   490 AELYTIGWIYGTDRLCKDIEFMLGRK-------VGL---YWRLCWSIITPLIMTVILI------Y 538
            ||:..:.::||......|::.|.|..       :|.   |:...|..:||::.:::::      |
 Worm   518 AEVLIVAYVYGRRNQLADMKEMFGESKNKCTSWIGQHSPYFGFNWMFVTPVLGSILIVLASIRQY 582

  Fly   539 FYATYQ------PLTYNNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGAFT 597
            .|.|.:      ||.::         .:||.:....:..:||:...|.|.  .:..|..:|..|.
 Worm   583 PYQTDENKPNMYPLAFD---------IVGWAVCLLPMALVPIFAFCAFVE--FKRKGHDLRALFM 636

  Fly   598 PKK 600
            .::
 Worm   637 KQR 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 181/603 (30%)
snf-9NP_503077.2 SLC6sbd 52..577 CDD:271359 166/531 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28590
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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