DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and snf-5

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_496735.1 Gene:snf-5 / 174923 WormBaseID:WBGene00004904 Length:728 Species:Caenorhabditis elegans


Alignment Length:599 Identity:183/599 - (30%)
Similarity:293/599 - (48%) Gaps:40/599 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 DDGRSTASTVEISTNSPALRDNSDDQEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTA 80
            |..|.......::|..|.|....:::|     |:|..:|...||:::.:.::|||||:||||..|
 Worm    53 DPSRIDTKNTTVTTTRPTLDTPPEEEE-----EKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRA 112

  Fly    81 LDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVF-DLCPAMKGVGAGQAFQVFMLST 144
            .:|||.|||||||...||.|.|..|.|.:.||:..:....:| .:.|.::|||....|...:::.
 Worm   113 YNNGGSAFLIPYLTCAFLFGLPAVYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAI 177

  Fly   145 YYAALVAIIGRYFIESFRNPLP-WSTCRAEW--GIHCINSA------------PDASNW-SQLES 193
            ||..:|:.|..|.|...|.... ||.|..:|  |..||..|            .:::.| |.|..
 Worm   178 YYIVIVSWISIYMINICRGHFALWSHCNNDWNNGTSCITMADQYLCKNHTKVMANSTLWNSSLPI 242

  Fly   194 NDQRPQ-NYTMKSQNDR-VITSSEWYFVKEVLHEKPNIEEGIGLPNWELVIGLFIAWSCVFFIIR 256
            .|:... |...:..|.. |.|::|.||:..::.....:.:..|. ||.:...:.:.|......|.
 Worm   243 PDKMVYFNGACQDANGTDVSTATEQYFMTYIVQPSSGMLDFGGF-NWPVFAAMSVCWLLTGLGIL 306

  Fly   257 RGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGI-YYFIKPQWGKILDPKVWYAAVTQCFY 320
            :|.|..||.||...|.|||::.||.:..|...||..|: .||..|.:.|:.:...|..|:.|..:
 Worm   307 KGAKIMGKISYVSVLVPYVLVVVLFINGVFQDGSGVGLEMYFGTPNYTKLYEQDTWTEALKQLCF 371

  Fly   321 SLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVK 385
            ||||..|.:|..||::...:|:.|||.||...||..||:.|..:|..||:||...| .|:..|||
 Worm   372 SLSVGHGGLISLSSYSPKRNNIFRDALIVIIGDTTMSLVGGGAVFATLGYLAKATG-QDVKDVVK 435

  Fly   386 GGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDRFPNF--GQWQC 448
            .|..|||:.||:|:.:.. :|.::..:||||||:||..:.||:.....:.|.|::|.|  .:|..
 Worm   436 SGLSLAFVVYPEAMTRMP-VPWLWCFIFFLMLFLLGASTEIALVDVFCSCIYDQYPRFRNRKWIV 499

  Fly   449 SLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALVLGIAELYTIGWIYGTDRLCKDIEFMLG 513
            .:....|.:.|||::.|..|.|...:.|.:.|...::...:.||..:.:|||...:..||..::|
 Worm   500 VIAWCSVLYCIGLVFSTRAGYYWFEMFDEYAAGFSSVCTVVCELLVMMYIYGFRNVRDDITEVVG 564

  Fly   514 R-------KVGL---YWRLCWSIITPLIMTVILIYFYATYQPLTYNNIVYPNWSYSIGWLITAFG 568
            .       .:|.   |:...|.:|:|.|..:::...:....|....:.:||......||.::...
 Worm   565 HARNKFTGAIGAHSWYFTANWMVISPSIALILVGLSFVREYPYMGRHDIYPAVFDIFGWFLSFLP 629

  Fly   569 ILQLPIWMIVAIVR 582
            ::.:||:|::..:|
 Worm   630 VIIVPIFMLLNFIR 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 176/565 (31%)
snf-5NP_496735.1 SLC6sbd 83..601 CDD:271359 166/520 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28590
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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