DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and snf-2

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_492396.2 Gene:snf-2 / 172701 WormBaseID:WBGene00004901 Length:746 Species:Caenorhabditis elegans


Alignment Length:686 Identity:202/686 - (29%)
Similarity:325/686 - (47%) Gaps:100/686 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TASTVEISTNSP----------------------ALRD-----NSDDQEAAKVPEERATWGKGVE 58
            |..||:.:..:|                      |.||     |:|.|..           :|:|
 Worm    63 TTKTVQSTITNPVSFLDSEVTAKEYVKDGGAARKAYRDAIQVENTDRQAF-----------RGIE 116

  Fly    59 FLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVF- 122
            .|:|.:..::||||:||||..|..|||.:|||.|:|..|:...|..::|..:||::::....|| 
 Worm   117 SLLSSLGQAIGLGNIWRFPTVAYQNGGTSFLIVYIICAFVFAVPAIHMEFALGQYAAKSPPAVFR 181

  Fly   123 DLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESF------RNPLPW--STC-------RA 172
            .:.||::|||........::..||..|::.|..|.|..|      |...||  :.|       |.
 Worm   182 RIMPALEGVGWMTCIVGAVIGVYYMILISWIVLYIINIFYVNNMGRCDNPWNQNNCYDGSEQSRC 246

  Fly   173 EWGIHCINSAPDASNWSQ------LESNDQRPQNYTMKSQ---NDRVITSSEWYFVKEVLHEKPN 228
            ..|::. |...:||::..      :.|..:|......|.|   |..|...:|.:|.|.|:.....
 Worm   247 NKGLYS-NMTANASSFLNTTMAPLMSSGSKRILYINGKCQDATNMSVEVGTEQFFSKSVIRPSAG 310

  Fly   229 IEE--GIGLPNWELVIG-LFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGS 290
            ..:  .|.||    ::| :.:.|.....::.||:|:.||.||...:.||.|:..||:..|:|||:
 Worm   311 FTDFNSINLP----ILGAVALCWVIAAVVLIRGMKAIGKLSYVTVILPYFIIVSLLICGVSLPGA 371

  Fly   291 IDGIYY-FIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDT 354
            .||:|: |.:..:..:...:.|.||:.|..:|||:..|.::..:|:||..:|.:||..|:..|||
 Worm   372 KDGLYHLFGQTDFNYLYKRETWTAALQQICFSLSIGQGGLMNIASYNKKTYNWYRDVYIIVFLDT 436

  Fly   355 MTSLLAGFTIFGILGHLAHEIG-----TDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFF 414
            :.|:|.|.|:|..||.||:|.|     .|....:||.|..||||.|.:|||:.. :|.::..|||
 Worm   437 LMSILGGITVFSTLGFLAYERGINSTDIDAFNHIVKEGHALAFIVYTEAIAEMP-VPYLWYALFF 500

  Fly   415 LMLFVLGIGSNIAMTS--CSVTAIRDRFPNFGQWQCSLLIAVVSFFIGLMYITPGGQYMLTLVDF 477
            :|||:|||.:.:.:..  ||..|.|.|:....:|...|.::.|.|.:||:..|..|.|...:.|.
 Worm   501 IMLFLLGISTEVVIVEIVCSCLADRFRYLRERRWLTVLSVSAVFFLLGLVMTTDAGFYWFDMFDE 565

  Fly   478 FGASMIALVLGIAEL-YTIGWIYGTDRLCKDIEFMLGR----------KVGLYWRLCWSIITPLI 531
            :... |:...|.|.: .|:.|.|||:...:||..|.|.          ....:|.|.|..:||:.
 Worm   566 YSTG-ISATFGTAIMCMTVFWCYGTNHFREDIAVMWGEPESWLATCLGPAAYFWTLIWKFVTPVC 629

  Fly   532 MTVIL-IYFYATYQPLTYNNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGA 595
            ..::: ::.:....|...:..:||....::||.|.....|.:|.:.|.|::..  :.:...||||
 Worm   630 SLLMMGLWIWEKKYPHKGDGKIYPPVFDALGWFIAVVPFLVIPGFAIAAVINT--RRMNIPIRGA 692

  Fly   596 FTPKKNWGPSDPLLREQ---YHKEIENELTPKRGQG 628
            |..:|. .||...:.||   :.|.|.::| |::..|
 Worm   693 FMLQKQ-HPSYDRISEQWPEWKKAIGDKL-PEQEPG 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 182/595 (31%)
snf-2NP_492396.2 SLC6sbd 113..638 CDD:271359 167/531 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28590
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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