DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and Slc6a4

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_034614.2 Gene:Slc6a4 / 15567 MGIID:96285 Length:630 Species:Mus musculus


Alignment Length:641 Identity:214/641 - (33%)
Similarity:352/641 - (54%) Gaps:68/641 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDTTQRNHQNLAFVGDD------------GRST----ASTVEISTNSPALRDNSDDQEA------ 43
            |:||..|.|.:.....|            |..|    |...:||....|:...|...||      
Mouse     1 METTPLNSQKVLSECKDKEDCQENGVLQKGVPTPADKAGPGQISNGYSAVPSTSAGDEAPHSTPA 65

  Fly    44 ------AKVPE-ERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGK 101
                  |::.: ||.||||.::||:|.|..:|.|||:||||:....|||||||:||.|:....|.
Mouse    66 ATTTLVAEIHQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLPYTIMAIFGGI 130

  Fly   102 PIYYLEMVIGQFSSRGSVKVF-DLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPL 165
            |::|:|:.:||:...|.:.:: .:||..||:|.......|.:::||..::|....|.|.||.:.|
Mouse   131 PLFYMELALGQYHRNGCISIWKKICPIFKGIGYAICIIAFYIASYYNTIIAWALYYLISSFTDQL 195

  Fly   166 PWSTCRAEWGI-HCIN-SAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVL--HEK 226
            ||::|:..|.. :|.| .|.|...|             |:.|     .:.:|.::::.||  |:.
Mouse   196 PWTSCKNSWNTGNCTNYFAQDNITW-------------TLHS-----TSPAEEFYLRHVLQIHQS 242

  Fly   227 PNIEEGIGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSI 291
            ..::: :|..:|:|.:.:.:.::.::|.|.:|||:|||..:..|.|||:::.|||||..||||:.
Mouse   243 KGLQD-LGTISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGATLPGAW 306

  Fly   292 DGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMT 356
            .|:.:::||.|.|:|:..||..|..|.|:||...||.::.::|:|||.:|.::||.:.:.::.||
Mouse   307 RGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQDALVTSVVNCMT 371

  Fly   357 SLLAGFTIFGILGHLAHEIGTDDIGSVVK-GGAGLAFISYPDAIAKFKNLP--QIFSVLFFLMLF 418
            |.::||.||.:||::| |:..:|:..|.| .|..|.||:|.:|||   |:|  ..|:::|||||.
Mouse   372 SFVSGFVIFTVLGYMA-EMRNEDVSEVAKDAGPSLLFITYAEAIA---NMPASTFFAIIFFLMLI 432

  Fly   419 VLGIGSNIAMTSCSVTAIRDRFPNFGQW----QCSLLIAVVSFFIG-LMYITPGGQYMLTLVDFF 478
            .||:.|..|.....:||:.|.||:.  |    :..:||.|::..:| |:.:|.||.|::||::.:
Mouse   433 TLGLDSTFAGLEGVITAVLDEFPHI--WAKRREWFVLIVVITCILGSLLTLTSGGAYVVTLLEEY 495

  Fly   479 GASMIALVLGIAELYTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATY 543
            ......|.:.:.|...:.|.||..:.|.|::.|||...|.:||:||..|:||.:..|:..|..:.
Mouse   496 ATGPAVLTVALIEAVVVSWFYGITQFCSDVKEMLGFSPGWFWRICWVAISPLFLLFIICSFLMSP 560

  Fly   544 QPLTYNNIVYPNWSYSIGWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGAFTPK 599
            ..|......||:||..:|:.|....::.:||::|..::..|| ||..:|..:.||:
Mouse   561 PQLRLFQYNYPHWSIILGYCIGTSSVICIPIYIIYRLISTPG-TLKERIIKSITPE 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 195/560 (35%)
Slc6a4NP_034614.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 15/61 (25%)
5HT_transport_N 24..64 CDD:281488 9/39 (23%)
SLC6sbd_SERT 79..615 CDD:271399 196/561 (35%)
Interaction with RAB4A. /evidence=ECO:0000250 616..624 214/641 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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