DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and Slc6a20

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_579830.1 Gene:Slc6a20 / 113918 RGDID:621651 Length:616 Species:Rattus norvegicus


Alignment Length:644 Identity:182/644 - (28%)
Similarity:312/644 - (48%) Gaps:112/644 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RDNSDDQEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLI 99
            |...|::.|..:.:.|..||..::|:.:||:.:||||||||||:.....|||:||:||||:|.:.
  Rat    14 RPGPDEKRARDMEKARPQWGNPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYLIMLIVE 78

  Fly   100 GKPIYYLEMVIGQFSSRGSVKVF-DLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRN 163
            |.|:.|||:.:||...:||:..: .:.|.:.|||.......|.||.||..:.|....|...||::
  Rat    79 GMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQD 143

  Fly   164 PLPWSTCRAEWGIHCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVLHEKPN 228
            |||||.|.       :||                  |.|...:.....:|:::::.::.|:..|:
  Rat   144 PLPWSVCP-------LNS------------------NRTGYDEECEKASSTQYFWYRKTLNISPS 183

  Fly   229 IEEGIGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDG 293
            |:|..|: .||..:.|.:||..|:..|.||.:|:||..||.||.||.::.:.|||.:||.|:.:|
  Rat   184 IQENGGV-QWEPALCLTLAWLMVYLCILRGTESTGKVVYFTALMPYCVLIIYLVRGLTLHGATNG 247

  Fly   294 IYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSL 358
            :.|...|:..::.:||.|..|.||.|:||.:.||::|.::|:|:..::..:.|.||:.:::.||:
  Rat   248 LMYMFTPKIEQLANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNDCQKHAVIVSVINSSTSI 312

  Fly   359 LAGFTIFGILG------------------------------------------------------ 369
            .|....|.|.|                                                      
  Rat   313 FASIVTFSIYGFKATFNYENCLNKVILLLTNSFDLEDGFLTASNLEEVKDYLASTYPNKYSEVFP 377

  Fly   370 HLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVT 434
            |:.:.....::.:.|: |.|||||.|.:|| |...:.|::|||:|.||.:||:||.:..|:..:|
  Rat   378 HIRNCSLESELNTAVQ-GTGLAFIVYAEAI-KNMEVSQLWSVLYFFMLLMLGMGSMLGNTAAILT 440

  Fly   435 AIRDR------FPNFGQWQCSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALVLGIAELY 493
            .:.|.      .|   :...|.|:.:::..:|:::....|.|...:.:.:.|::..|::.:.|..
  Rat   441 PLTDSKVISSYLP---KEAISGLVCLINCAVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETI 502

  Fly   494 TIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTYNNIVYPNWSY 558
            .:.::||..|...|:..|.||.:..||:..|:.::||::..:.|::.:.|  :....:.|..|..
  Rat   503 AVCYVYGLRRFESDLRAMTGRPLNWYWKAMWAFVSPLLIIGLFIFYLSDY--ILTGTLQYQAWDA 565

  Fly   559 SIGWLIT---------AFGILQLPIWMIVAIVRDPGQTLGAKIRGAFTPKKNWGPSDPL 608
            :.|.|:|         ..|:|.....|.:.:|     .||..||.    :...|.|.|:
  Rat   566 TQGQLVTKDYPPHALAVIGLLVASSTMCIPLV-----ALGTFIRN----RLKRGGSSPV 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 176/617 (29%)
Slc6a20NP_579830.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 3/11 (27%)
SLC5-6-like_sbd 26..601 CDD:294310 173/612 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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