DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and Slc6a20a

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_631881.1 Gene:Slc6a20a / 102680 MGIID:2143217 Length:592 Species:Mus musculus


Alignment Length:614 Identity:176/614 - (28%)
Similarity:301/614 - (49%) Gaps:108/614 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFS 114
            |..||..::|:.:||:.:||||||||||:.....|||:||:||:|:|.:.|.|:.|||:.:||..
Mouse     5 RPQWGHPLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVGQRM 69

  Fly   115 SRGSVKVF-DLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAEWGIHC 178
            .:||:..: .:.|.:.|||.......|.||.||..:.|....|...||::|||||.|.       
Mouse    70 RQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWGFWYLFHSFQDPLPWSVCP------- 127

  Fly   179 INSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVLHEKPNIEEGIGLPNWELVIG 243
            :||                  |:|...:.....:|:::::.::.|:..|:|:|..|: .||..:.
Mouse   128 LNS------------------NHTGYDEECEKASSTQYFWYRKTLNISPSIQENGGV-QWEPALC 173

  Fly   244 LFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWGKILDP 308
            |.:||..|:..|.||.:|:||..||.|..||.::.:.|||.:||.|:.:|:.|...|:..::.:|
Mouse   174 LTLAWLMVYLCILRGTESTGKVVYFTASMPYCVLIIYLVRGLTLHGATNGLMYMFTPKMEQLANP 238

  Fly   309 KVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILG---- 369
            |.|..|.||.|:||.:.||::|.::|:|:..:|..:.|.||:.:::.||:.|....|.|.|    
Mouse   239 KAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSIINSSTSIFASIVTFSIYGFKAT 303

  Fly   370 --------------------------------------------------HLAHEIGTDDIGSVV 384
                                                              |:.:.....::.:.|
Mouse   304 FNYENCLNKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNKYSEVFPHIRNCSLESELDTAV 368

  Fly   385 KGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDR------FPNF 443
            : |.|||||.|.:|| |...:.|::|||:|.||.:|||||.:..|:..:|.:.|.      .|  
Mouse   369 Q-GTGLAFIVYTEAI-KNMEVSQLWSVLYFFMLLMLGIGSMLGNTAAILTPLTDSKVISSYLP-- 429

  Fly   444 GQWQCSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALVLGIAELYTIGWIYGTDRLCKDI 508
             :...|.|:.:::..:|:::....|.|...:.:.:.|::..|::.:.|...:.::||..|...|:
Mouse   430 -KEAISGLVCLINCAVGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLKRFESDL 493

  Fly   509 EFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTYNNIVYPNWSYSIGWLIT-------- 565
            ..|.||.:..||::.|:.::||::..:.|::.:.|  :....:.|..|..:.|.|:|        
Mouse   494 RAMTGRTLSWYWKVMWAFVSPLLIVGLFIFYLSDY--ILTGTLQYQAWDATQGQLVTKDYPPHAL 556

  Fly   566 -AFGILQLPIWMIVAIVRDPGQTLGAKIR 593
             ..|:|.....|.:.:|     .||..||
Mouse   557 AVIGLLVASSTMCIPLV-----ALGTFIR 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 176/614 (29%)
Slc6a20aNP_631881.1 SLC5-6-like_sbd 2..577 CDD:294310 173/609 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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