DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15279 and slc6a1

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_002941943.4 Gene:slc6a1 / 100491859 XenbaseID:XB-GENE-5824076 Length:622 Species:Xenopus tropicalis


Alignment Length:635 Identity:219/635 - (34%)
Similarity:334/635 - (52%) Gaps:64/635 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GDDGRSTAST-----VEISTNSPALRDNSDD--------------QEAAKVPEERATWGKGVEFL 60
            |:|..|:..|     .:|..:|..|...:|:              |:..|..::|.||....:||
 Frog    17 GEDCHSSIGTGFRSMGKIDCDSVELTSPNDEHHALPGETLYLPFGQKKKKADDDRGTWKGKFDFL 81

  Fly    61 MSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVFDLC 125
            :||:..::|||||||||:....||||||||||.:.|...|.|:::||..:|||:|.|.:.|:.|.
 Frog    82 LSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLFFLETALGQFTSIGGLGVWKLA 146

  Fly   126 PAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAEWGIHCINSAPDASNWSQ 190
            |..||||.......|.|:.||..::|....|...||.:.|||.:|...|                
 Frog   147 PMFKGVGMAAVVLSFWLNIYYIVIIAWALYYLFNSFSSTLPWQSCDNSW---------------- 195

  Fly   191 LESNDQRP-QNYTMKSQNDRVITSSEWYFVKEVLHEKPNIEEGIGLP---NWELVIGLFIAWSCV 251
               |.:|. .||::...::  :||:...|.:..:|:   :..|:|.|   .|.|...|.:||..|
 Frog   196 ---NTERCFSNYSLNDTSN--LTSAVTEFWERNMHQ---MTGGLGEPGNIRWPLACTLALAWIMV 252

  Fly   252 FFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVT 316
            :|.|.:||:.:||..||.|.:||.::.:|..|.:||||::|||.::|.|.:.|:.:.:||..|.|
 Frog   253 YFSIWKGVEWTGKVVYFSATYPYFMLVILFFRGITLPGAMDGIRFYITPDFSKLSNSEVWMDAAT 317

  Fly   317 QCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIG 381
            |.|:|..:..|::|...|:|.|.:|::||:.||.|:::.||:.|||.||.|:|.::| |....|.
 Frog   318 QIFFSYGLGLGSLIALGSYNAFDNNIYRDSIIVCGINSTTSMFAGFVIFSIVGFMSH-ITKKPIQ 381

  Fly   382 SVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNIAMTSCSVTAIRDRFPNFGQW 446
            .:...|.||||::||.|:.:....| ::|:|||.||.:||:.|........:||:.|.:|...:.
 Frog   382 ELAASGPGLAFLAYPQAVTQLPMSP-VWSILFFSMLVMLGLDSQFCTVEGFITALVDEYPQCLRS 445

  Fly   447 QCSLLIAVV---SFFIGLMYITPGGQYMLTLVDFFGAS-MIALVLGIAELYTIGWIYGTDRLCKD 507
            :..:.||:|   ||.||...||.||.|:..|.|::.|| |..|.|...|..:|.|.||.||..:|
 Frog   446 RKKVFIAMVCFISFIIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETVSISWCYGVDRFYQD 510

  Fly   508 IEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTYNNIVYPNWSYSIGWLITAFGILQL 572
            ||.|:|.:...:|:|||:..||.|...:..:......|||....|||.|...||||:....::.:
 Frog   511 IEEMIGYQPCSWWKLCWAYFTPCICLGVFCFSVFEMTPLTLGRYVYPAWGQGIGWLMALSSMVFI 575

  Fly   573 PIWMIVAIVRDPGQTLGAKIRGAFTPKKNWGPSDPLLREQYHKEIENELT 622
            |.:|:..::...| ||..:.|....||          .||..::|...|:
 Frog   576 PGYMLYLLLTTKG-TLRQRFREMTQPK----------MEQIMQKIRPRLS 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 203/555 (37%)
slc6a1XP_002941943.4 SLC5-6-like_sbd 62..611 CDD:382020 210/585 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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