DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15279 and LOC100490052

DIOPT Version :9

Sequence 1:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_002942758.1 Gene:LOC100490052 / 100490052 -ID:- Length:649 Species:Xenopus tropicalis


Alignment Length:615 Identity:221/615 - (35%)
Similarity:330/615 - (53%) Gaps:55/615 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FVGDDGRSTASTVEISTNSP--ALRDNSDDQEAAKVP------EERATWGKGVEFLMSCIAMSVG 69
            |.||:|.::....:....|.  ..:|.:|.|..|::.      ..|.|||...|||:|||...||
 Frog    25 FGGDEGAASPGRAQDPPGSEPGTSQDGTDAQRVAELAPPAPAGPPRETWGGKYEFLLSCIGYCVG 89

  Fly    70 LGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKPIYYLEMVIGQFSSRGSVKVFDLCPAMKGVGAG 134
            ||||||||:....||||||||||.|:||..|.|::.:|:.:||:.:.|.:.|:..||.:||:|.|
 Frog    90 LGNVWRFPYLCYRNGGGAFLIPYSIMLFFTGLPLFLMELSLGQYGAAGPITVWKCCPILKGIGIG 154

  Fly   135 QAFQVFMLSTYYAALVAIIGRYFIESFRNPLPWSTCRAEWGIHCINSAPDASNWSQLESNDQRPQ 199
            ......::|.||..::|....|..:||::|||||...|.:...|.|...:.|.:|..|:      
 Frog   155 MLLVSALVSLYYNVIIAWTFYYLGQSFQSPLPWSCDSALYSQLCQNGTSNGSQFSATEA------ 213

  Fly   200 NYTMKSQNDRVITSSEWYFVKEVLHEKPNIEEGIGLP---NWELVIGLFIAWSCVFFIIRRGVKS 261
                 ..|::|:         .|.|     ..|:|.|   .|||.:.|..||..:|..:.:|:.|
 Frog   214 -----FWNEKVL---------GVTH-----SSGLGDPGPVGWELALCLLAAWFIIFLCMLKGIHS 259

  Fly   262 SGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYFIKPQWGKILDPKVWYAAVTQCFYSLSVCF 326
            |||..||.|.|||.:|.||::|..||.|||||:.:::...|.::...:||..|.:|.||||.:.|
 Frog   260 SGKIVYFTATFPYFVMVVLIIRGATLEGSIDGVRFYLTADWKRLQSAQVWNDAASQIFYSLGIGF 324

  Fly   327 GNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGFTIFGILGHLAHEIGTDDIGSVVKGGAGLA 391
            |.::..:|:|||.:||.||..::...:..||..|||.||.:|||:|.:.|. .:|.|...|.|||
 Frog   325 GGLLSMASYNKFNNNVIRDTLVIAIGNCSTSFFAGFAIFSVLGHMAWKKGV-PVGQVADSGPGLA 388

  Fly   392 FISYPDAIAKFKNLP-QIF-SVLFFLMLFVLGIGSNIAMTSCSVTAIRDRFPNFGQWQCSLL--- 451
            |::||:|:|.   || .:| |:|||||||.||:.:.........|||.|..|:...|:...:   
 Frog   389 FVAYPEALAL---LPGSVFWSILFFLMLFTLGVDTLFGNMEGITTAILDEIPSLRDWKRKTIFLG 450

  Fly   452 -IAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALVLGIAELYTIGWIYGTDRLCKDIEFMLGR- 514
             :....:.:||:.||.||.|..||:|.:..|...:::.:.....|.:.||.::.|:||..|:.: 
 Frog   451 CLCFAFYLLGLLLITQGGIYWFTLIDSYSTSFGLIIIALFMCLGIAFFYGVNQFCQDILDMVSQC 515

  Fly   515 -----KVGLYWRLCWSIITPLIMTVILIY-FYATYQ-PLTYNNIVYPNWSYSIGWLITAFGILQL 572
                 ||..|::.||..||||::..||.| |...|. ||.|...|||.|..::|..:.....:|:
 Frog   516 PPWCTKVLWYFKACWVFITPLLLLFILFYIFLEMYNTPLRYGAYVYPRWGQALGICMGTLCCIQI 580

  Fly   573 PIWMIVAIVRDPGQTLGAKIRGAFTPKKNW 602
            |||..||::::.| ||..:.:.:..|...|
 Frog   581 PIWATVAVLKETG-TLKERFKKSLRPLNTW 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 210/564 (37%)
LOC100490052XP_002942758.1 SLC5-6-like_sbd 70..610 CDD:382020 212/570 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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